Gene Rleg_3383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3383 
Symbol 
ID8014261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3398778 
End bp3399635 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content64% 
IMG OID644825942 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002977169 
Protein GI241206073 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.247848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA TCGTGCATGC TCCGGTCGGC GGGCCGTCCT TCCTCAAGCG CATGCTGCGC 
TCACCCTCGG CGGCAGCCGG TCTTGTCGTC GTTGCCGTCA TCCTGCTTGC CGCACTTCTT
GCGCCAGTAA TCGCCCCTTA CGACCCCAAC CTGCAGGAAA CCGCCAACCG GTTGATGCCG
CCGACCTCGG CGCATTGGTT CGGCACCGAT GCCTTTGGCC GGGATATACT GTCGCGGCTG
ATCTATGGCG CGCGGCCGAC CCTGCTGCTG GTGCTTGTCG TCGTTCTGCT GATGGCGCCG
CTCGGCATCG TCGTCGGCAT TCTCGCCGGT TTCTTCGGCG GGCTGACCGA ACGCCTGTTG
ATGCGCGTCA CCGATATCGT CATGTCCTTC CCGCGCCTGT TGCTCGCCTT TGCCTTCGTC
GCCATCATGG GACCGGGCCT GATCAACGGC GCGCTGGCGC TGGCGCTGAC AAGCTGGCCC
GCCTATGCCC GGCAGGCCCG CGTCGAGACA GCGGCCCTGC GGCGCAGCGA TTATCTTGCC
GTCGCCGAAA TGGTCGGTAT CAAGGGTGTC CGGCTGCTCT GGGGGCATAT CCTGCCGTTG
GTGCTGCCAT CCGCCATCAT CCGGCTGGCG CTCGATCTCT CTGGCATCAT CCTCGCTGCC
GCCGGCCTCG GCTTTCTTGG CCTCGGCGTG CGTCCGCCAA CGGCGGAATG GGGATCTATG
GTTTCGGAAG GAACGCAGGT GATCTTCGAT CAATGGTGGG TGGCGGCGGT GCCGGGTCTT
GCAATCTTCA TCACGTCATT CGCTTTCAAC CTGCTTGCCG ACGGGCTGCG CGATATCCTG
GATCCACGCC ATGACTGA
 
Protein sequence
MSVIVHAPVG GPSFLKRMLR SPSAAAGLVV VAVILLAALL APVIAPYDPN LQETANRLMP 
PTSAHWFGTD AFGRDILSRL IYGARPTLLL VLVVVLLMAP LGIVVGILAG FFGGLTERLL
MRVTDIVMSF PRLLLAFAFV AIMGPGLING ALALALTSWP AYARQARVET AALRRSDYLA
VAEMVGIKGV RLLWGHILPL VLPSAIIRLA LDLSGIILAA AGLGFLGLGV RPPTAEWGSM
VSEGTQVIFD QWWVAAVPGL AIFITSFAFN LLADGLRDIL DPRHD