Gene Rleg_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3378 
Symbol 
ID8014258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3393346 
End bp3394140 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID644825937 
Producthydroxypyruvate isomerase 
Protein accessionYP_002977164 
Protein GI241206068 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID[TIGR03234] hydroxypyruvate isomerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.490297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0397331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAAAT TTTCCGCAAA CCTTTCCTTC CTCTACCAGG ACCTGCCCTT TCTCGACCGC 
TTCACGGCAG CCGCAGAGGA CGGCTTCGGC GCCCTCGAAT ATCTCGGCCC CTATGCCGAA
CCCAAGGAGA AGGTCGCCGA GGCGCTGGAG GCGAGCGGCC TGAAACAGGC GCTCTTCAAC
GTGCCATCAG GCGACTGGGC CGGCGGCGAG CGTGGCATCG CCTGCCTGCC GGACCGCGTA
GAGGAGTTCC GCAACGGGAT CGCGCAGGCG CTCGATTATG CCGCAGCGCT CGATTGCCGG
CAGGTGAATG TCATCTCCGG GCTGGTGCCG AAGGGTGCAG ACCTTCAAAC GCTGGAAACG
GTGCTGGTCG ACAATCTGAA ATATGCAGCA AAGCGTTGTG CCGACGTCGG CGTCAAGCTG
CTGGTCGAGC CGATCAACCT GCGCGATATT CCCGGCTTCT TCCTGTCGAC CACAGCTGAT
GCCGAACGCA TTCTCGACCG GGTCGGCTCG GACAATCTCT ACATCCAGTA TGATTTCTAC
CACATGCAGA TCATGCAGGG CGACCTGATC CCCACCTTCA TCCGGCTGAA GGAGAAGATT
GCCCATGTCC AGATCGCTGA CAATCCCGGC CGGGGCGAAC CCGGCACCGG TGAGATCAAC
TACGGTTTCA TCCTCTCCGA GCTCGATCGC CTCGGCTACG ACGGCTGGGT GGGCTGCGAG
TACAAGCCGA AATCCGGCAC CAGCGAAGGC CTCGGCTGGA TGAAACCCTA TCTGAAGTCA
GCGAGGACAG CATGA
 
Protein sequence
MPKFSANLSF LYQDLPFLDR FTAAAEDGFG ALEYLGPYAE PKEKVAEALE ASGLKQALFN 
VPSGDWAGGE RGIACLPDRV EEFRNGIAQA LDYAAALDCR QVNVISGLVP KGADLQTLET
VLVDNLKYAA KRCADVGVKL LVEPINLRDI PGFFLSTTAD AERILDRVGS DNLYIQYDFY
HMQIMQGDLI PTFIRLKEKI AHVQIADNPG RGEPGTGEIN YGFILSELDR LGYDGWVGCE
YKPKSGTSEG LGWMKPYLKS ARTA