Gene Rleg_3376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3376 
Symbol 
ID8014256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3390407 
End bp3391597 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content65% 
IMG OID644825935 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002977162 
Protein GI241206066 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0964452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0737316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC ACGAAACCTT CGGAGCCCAT GCTGGTCCGC TTCACACCGT TGCCGATGGT 
CCCTCGATCA GCCCGCTGAA ACAGGGCAAG ACCGTCTCGA CCGCCGCGAT CGGCCCCTGG
CGGCTGGTCG CCGGCAAACT GGTTCGCCAG AAGGTGGCGA TGGTGGCCGG CGCCATCATC
CTCTTCCTCT ATCTGGTCGG CCTCTTCGCC GAATTCCTGG CGCCGGCTTT GCCGATGACC
TCGCGGCCGC AATATACCTA TGCCCCGCCG CAGGGCTTCA GCTTCTTCGT CGAGAAACCG
GACGGCAGCT CGGAGTTCAA TTTCCACGTG AAGGGCTACA AGGTCGAGAT CGACAAGGTG
GCGCTGCGCC GCACCTTCGT CGTCGACGAC ACCAAGGTCG TCCCGATCGG CTTCTTCGTC
AAAGGCGCGG CCTACGATCT CTGGGGCCTG ATCCCGATGA ACCGCCACCT GATCGGCCCC
CTCAACCAGA ACGATCCGAT GTACCTGCTC GGCGCCGACC GGCTCGGTCG CGACGTCTTC
TCGCGGCTCG TCTACGGAAC CCGCGTATCC ATGTCGATCG GCCTCGTCGG CGTCGCCATG
TCGCTGATCC TCGGTGTCGT GCTCGGCTCG ATCTCCGGCT TCTACGGCGG CTGGGTCGAT
ACGCTGATCC AGCGTGTCAT CGAGGTCGTC AGCGCCATGC CGACCATCCC GCTGTGGCTC
GGCCTGGCGG CGGCGATCCC GCTGACATGG TCGCCGGTCA ATGTCTATTT CGTCATAACG
ATCATCGTCT CGCTGCTCGG CTGGACCAGC CTGGCGCGGG AGGTGCGCGG CCGGTTCCTG
GCACTGCGCA GCGAGGATTT CGTCGTCGCC GCCCGGCTCG ACGGATCGAG CGAAGCGCGG
CTGATCTTCC GCCACATCCT GCCGTCGCTG ACGAGCCATA TCCTTGCGGT CGTGACGCTG
GCCGTGCCGA CGATGATTGT CGCCGAGACC TCGCTGTCCT TCCTCGGCAT CGGTCTCAAG
CCGCCGGTCG TTAGCTGGGG CGTGCTGCTG CAGGACGCCC AGAACATCCG CACCGTCGCA
ACCGCGCCGT GGCTCCTGAT CTGGCCGTCG CTCGCAGTCG TCGTCGCCGT CCTGTCCTTC
AATTTCTTCG GCGACGGCCT GCGCGATGCC GCCGACCCTT ACGACAATTG A
 
Protein sequence
MSTHETFGAH AGPLHTVADG PSISPLKQGK TVSTAAIGPW RLVAGKLVRQ KVAMVAGAII 
LFLYLVGLFA EFLAPALPMT SRPQYTYAPP QGFSFFVEKP DGSSEFNFHV KGYKVEIDKV
ALRRTFVVDD TKVVPIGFFV KGAAYDLWGL IPMNRHLIGP LNQNDPMYLL GADRLGRDVF
SRLVYGTRVS MSIGLVGVAM SLILGVVLGS ISGFYGGWVD TLIQRVIEVV SAMPTIPLWL
GLAAAIPLTW SPVNVYFVIT IIVSLLGWTS LAREVRGRFL ALRSEDFVVA ARLDGSSEAR
LIFRHILPSL TSHILAVVTL AVPTMIVAET SLSFLGIGLK PPVVSWGVLL QDAQNIRTVA
TAPWLLIWPS LAVVVAVLSF NFFGDGLRDA ADPYDN