| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3365 |
|---|
| Symbol | |
|---|
| ID | 8014245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 3375114 |
|---|
| End bp | 3376289 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644825924 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002977151 |
|---|
| Protein GI | 241206055 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.496799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0176512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACG CGCTTCGACA GATGGTGGTG CTTGGCTGTA TTGCCGCATT CATGCCTCTC
CCCGCACTGG CCCAGAGCGC CCCACCACCC CCGCCCGTCA CCGTTGCCAA GCCGGTCGTT
CGCGATGTCG TCGACAGCGA CGAGTTCATC GGCCGCTTCG AGCCGGTCGA CGAGGTCTCG
GTTCGCTCGC GCGTCGGTGG TTACCTGCAG GAAATTCATT TCCAGGACGG CGCATTGGTC
AAGCAGGGCG ACCTGCTCTT CGTCATCGAT CAGCGGCCGT TCGTAACCGC GCTCAATCAG
GCAAAGGCCA CACTCGAATC GGCGCAATCC GCCCTGGTCT TTGCCGACGC GCAATATAAG
CGCACGCAAT CGCTAACTTC GAGCGGCAGC CAGTCAGCCC AGACGCTGGA TGATCGCCGC
CGCGAATTCG ATTCGGCCGA GGCCAATGTC CGCGGCGCAC AGGCCGCAGC CGACCGCGCC
TCTCTCGACA TGGAATATAC CGAGATCAAG GCGCCGCTCA GCGGCCGCAT CGACCGCCGG
CTGATCTCGG CCGGCAACCT TGTGCAGACC GACCAGACTG TGCTGACGAC GATCGTTTCG
CTCGATCCGA TCGATTTTTA TTTCGACGTC GACGAGCGCC GCCTGCTGAA TTTCGCCGAC
ACCGCGCGCA AACTGGGCAA GGATCTGCAG CAGGGCGGTG GCGGACTTGA TGTGTCCGTC
ACGATCTCGG ATCCCAGTGC CAAACCGTTC AAGGGAAAGC TCGATTTCGC CGAGAACCGG
GTCGACAATG AGAGTGGCAC CATTCGTCTG CGTGCCCGCT TCCCCAATCC TGATCTCGTC
CTTCAGCCCG GCCTGTTCGG TCGAATACAG GTCGAAGCCT CCAACACCTA CCAGGCCATT
CTCGTCCCCG ACGAGGCCAT CGGCTCGGAC CAGAATGAGC GCGTCGTTTA TGTCGTCGCC
GAAGACGGCA CGGTTTCGAC CAAGCCCGTA AGGCCCGGAC CGCGCCTCTA CGGCTACCGC
GTCATACGCG AGGGTCTTGA TGGCACCGAG ACGATCATCG TCAACGGCCT GATGCGCGCC
CGGCCGGGCG CAAAGATCAC GCCTCAGATG ACCGAACTGC CGCAGGAGCG GCAGGACGCT
CCGCCGGAAA CTGCCGGCGC GGAGAGCGGA CAATGA
|
|---|
| Protein sequence | MTYALRQMVV LGCIAAFMPL PALAQSAPPP PPVTVAKPVV RDVVDSDEFI GRFEPVDEVS
VRSRVGGYLQ EIHFQDGALV KQGDLLFVID QRPFVTALNQ AKATLESAQS ALVFADAQYK
RTQSLTSSGS QSAQTLDDRR REFDSAEANV RGAQAAADRA SLDMEYTEIK APLSGRIDRR
LISAGNLVQT DQTVLTTIVS LDPIDFYFDV DERRLLNFAD TARKLGKDLQ QGGGGLDVSV
TISDPSAKPF KGKLDFAENR VDNESGTIRL RARFPNPDLV LQPGLFGRIQ VEASNTYQAI
LVPDEAIGSD QNERVVYVVA EDGTVSTKPV RPGPRLYGYR VIREGLDGTE TIIVNGLMRA
RPGAKITPQM TELPQERQDA PPETAGAESG Q
|
|---|
| |