Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3356 |
Symbol | |
ID | 8015789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3365927 |
End bp | 3366829 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644825915 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002977142 |
Protein GI | 241206046 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0553918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC AAGTCATCGT CATCACCGGC GCTTCCAGCG GTTTCGGCGC TCTCACCGCC CGCGCCCTCG CCAAGGCCGG CCATACCGTC TATGCCGGCA TGCGCGGCAC GGAAGGCCGC AACGCTCCGG CCGTCGCCGA TGTGGCTGAA TTCGCCAGGA ACAACAACGT CGATCTGCGC TCGGTCGAAC TCGATGTCGC CTCCGACGCG TCGGTTGTAT CAGGTATCGC CAGGATCATC ACCGATGTAG GCCGCCTCGA TGTCATCATC CACAATGCCG GCCATATGTC CTTCGGCCCG GCCGAAGCTT TCACGCCGGA ACAGTTCGCC GAGCTCTTCG ACATCAACGT GCTCTCCACC CAACGCGTCA ACCGCGCGGC ACTTCCGTAT CTGCGCAAGC AGGGCAGGGG CCTGGTGGTC TGGGTATCGT CGTCGAGCAG CCGCGGTGGC ACGCCTCCCT ACCTCTCGCC CTATTTCGCC GCCAAGGCGG CGATGGATTC ACTTGCCGTC TCCTATGCCG GCGAGCTGAC CCGCTGGGGC ATCGAGACCT CGATCATCGT GCCCGGCGCC TTCACCAAAG GCACCAACCA TTTCGCCCAT TCCGGCTCGC CTGATGATAC GGCCCGCGCC GCCGAATACA ATGAAGGACC CTACAAGGGC GTGCCGGAGC AGGCGCTGCA GGGCCTGGCA GCGCTCGAAC CTGCCGACGC CGATGCCGGC GCGGTTGCCG TCGCCATCGT CGATGTCGTC GGCAAGCCCT TCGGCACCCG GCCGTTCCGC GTCCACATCG ATCCGTCCGA GGACGGCGCC GAGATCGTCA ACGGCGTTGC CGACCGTGTC CGGGCGGAAT TGTTCCGCCG CATCGGCCTC GAGGACTTGC TGAAGCCGGC CGTCGGGAAT TGA
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Protein sequence | MSKQVIVITG ASSGFGALTA RALAKAGHTV YAGMRGTEGR NAPAVADVAE FARNNNVDLR SVELDVASDA SVVSGIARII TDVGRLDVII HNAGHMSFGP AEAFTPEQFA ELFDINVLST QRVNRAALPY LRKQGRGLVV WVSSSSSRGG TPPYLSPYFA AKAAMDSLAV SYAGELTRWG IETSIIVPGA FTKGTNHFAH SGSPDDTARA AEYNEGPYKG VPEQALQGLA ALEPADADAG AVAVAIVDVV GKPFGTRPFR VHIDPSEDGA EIVNGVADRV RAELFRRIGL EDLLKPAVGN
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