| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3325 |
|---|
| Symbol | |
|---|
| ID | 8014209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3330138 |
|---|
| End bp | 3330881 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644825884 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002977111 |
|---|
| Protein GI | 241206015 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.380458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGATG AAGTAATGAC GGGTCAACCG CTCCTTCAGG TGAATAGCGT CGAAACCTAT
TACGGCAATA TCCGGGCGCT GGCCGGCGTC GATGTCCACG TCAACAAGGG CGAGATCGTC
AGCCTGATCG GCGCCAACGG CGCCGGCAAG TCGACACTGA TGATGACGAT CTGCGGCAGC
CCGCAGGCCC GCACCGGTTC GGTGGTCTTC GAGGGCCGCG ACATCACCCA CATGCCGACG
CATGAAATCG CCCGTCTGCG CATTGCACAG TCACCGGAAG GCCGCCGCAT CTTCCCGCGC
ATGACGGTTC TGGAAAACCT TCAGATGGGC GCTGGCCTCG ACAATCTGAA ACACTTCGCC
GAAGACGTCG AGAAGATCTT CACGCTCTTC CCGCGTCTCA AGGAACGTCA CGCCCAGCGG
GGCGGAACAC TTTCGGGCGG TGAACAGCAG ATGCTGTCGA TCGGCCGCGC GCTGATGGCG
CGCCCGAAGC TGCTGCTTCT CGACGAACCC TCGCTCGGTC TCGCGCCGCT GATCGTCAAG
GGCATCTTCG AGGCGATCAA AAAGCTCAAC GAGGCGGAGG GGCTGACCGT TTTCCTCGTC
GAGCAGAACG CATTCGCCGC CCTCAGGCTT TCTCACCGCG CCTACGTGAT GGTGAACGGC
AAGGTGACGA TGAGCGGCTC CGGCAAGGAG CTTCTTGCCA ATCCCGAGGT CCGCGCCGCC
TATCTCGAAG GCGGAAGACA CTAG
|
|---|
| Protein sequence | MGDEVMTGQP LLQVNSVETY YGNIRALAGV DVHVNKGEIV SLIGANGAGK STLMMTICGS
PQARTGSVVF EGRDITHMPT HEIARLRIAQ SPEGRRIFPR MTVLENLQMG AGLDNLKHFA
EDVEKIFTLF PRLKERHAQR GGTLSGGEQQ MLSIGRALMA RPKLLLLDEP SLGLAPLIVK
GIFEAIKKLN EAEGLTVFLV EQNAFAALRL SHRAYVMVNG KVTMSGSGKE LLANPEVRAA
YLEGGRH
|
|---|
| |