| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3318 |
|---|
| Symbol | |
|---|
| ID | 8014202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3319423 |
|---|
| End bp | 3320715 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644825877 |
|---|
| Product | urea ABC transporter, urea binding protein |
|---|
| Protein accession | YP_002977104 |
|---|
| Protein GI | 241206008 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.490693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.457641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCA GAACTACTAT TGCGGGCGCT GCACTCGGCG CCGTCATGGC GGCCTCGGCT
GCCTTCAGCG GTGCGGTTGC CGCCGACGAT ACGATCAAGG TCGGCATTCT GCACTCGCTT
TCCGGCACCA TGGCCATCTC CGAGACCACG CTCAAGGACG CCATGCTGAT GCTCATCGAC
GAGCAGAACA AGAAGGGCGG CCTTCTCGGC AAGAAGCTCG AGGCCGTCGT CGTCGACCCG
GCTTCCGACT GGCCGCTATT TGCCGAAAAG GCACGTGAGC TGATCCAGAA GGACAAGGTT
GCCGCCGTCT TCGGTTGCTG GACGTCCTCG TCGCGCAAGT CCGTTCTGCC GGTTTTCGAA
GAGACCAACT CGATCCTCTT CTACCCGGTC CAGTATGAAG GCGAAGAGTC CTCGCGCAAC
ATCTTCTACA CCGGTGCTGC TCCGAACCAG CAGGCCATTC CTGCTGTCGA CTACCTGATG
GAAAAAGAAG GCGTCAAGCG CTTCGTTCTC GAAGGTACGG ACTACGTTTA TCCGCGCACG
ACCAACAAGA TTCTCGAGGC ATACCTGATT TCGAAGGGTA TTCCGAAAGA AGACATCATG
ACCAACTACA CGCCGTTCGG CTTCTCCGAC TGGCAGACCG AAGTTTCCAA GATCAAGGAA
TTCGGTTCGA CCGGCAAGAA GACCGCCGTC GTTTCCACGA TCAACGGCGA TGCCAACGTT
CCGTTCTACA AGGAACTGGG CAACAAGGGC ATCAAGGCAA CCGACATCCC CGTCGTCGCC
TTCTCGGTTG GCGAAGAAGA GCTTGCCGGC CTCGACACCA AGCCGCTCGT CGGCCATCTC
GCTGCCTGGA ACTACTTCGA GTCGGTCGAA AGCCCGGCGA ACAAGAAGTT CATCAAGGAC
TGGCACGCTT TCACCAAGAA CGACAAGCGC GTGACGAACG ACCCGATGGA AGCTGCGTAT
ATCGGCTTCA ATGCATGGGT TAAGGCCGTC CAGGCTGCCG GCACGACCGA TACCGACAAG
GTTCTCGACA CCATTATCGG CGTCAGCGTT CCGAACCTCT CCGGCGGTTA TGCGACCGTC
ATGCCGAACC ACCACATCAC CAAGCCGGTG CTGATCGGTG AAATCCAGGC CGACGGCCAA
TTCGAAATCG TCCAGCAGAC ACCTGCCGTC GTCGGCGACG AATGGTCAGA TTTCCTGCCT
GACTCCAAGG ATCTGATCTC CGATTGGCGC AAGCCGATGT CCTGCGGCAA CTTCAACGTC
GCTACGGGCA AGTGCGGTGG CAAGGGCTCC TGA
|
|---|
| Protein sequence | MNLRTTIAGA ALGAVMAASA AFSGAVAADD TIKVGILHSL SGTMAISETT LKDAMLMLID
EQNKKGGLLG KKLEAVVVDP ASDWPLFAEK ARELIQKDKV AAVFGCWTSS SRKSVLPVFE
ETNSILFYPV QYEGEESSRN IFYTGAAPNQ QAIPAVDYLM EKEGVKRFVL EGTDYVYPRT
TNKILEAYLI SKGIPKEDIM TNYTPFGFSD WQTEVSKIKE FGSTGKKTAV VSTINGDANV
PFYKELGNKG IKATDIPVVA FSVGEEELAG LDTKPLVGHL AAWNYFESVE SPANKKFIKD
WHAFTKNDKR VTNDPMEAAY IGFNAWVKAV QAAGTTDTDK VLDTIIGVSV PNLSGGYATV
MPNHHITKPV LIGEIQADGQ FEIVQQTPAV VGDEWSDFLP DSKDLISDWR KPMSCGNFNV
ATGKCGGKGS
|
|---|
| |