Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3289 |
Symbol | |
ID | 8014174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3288845 |
End bp | 3291412 |
Gene Length | 2568 bp |
Protein Length | 855 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644825848 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002977075 |
Protein GI | 241205979 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.363327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.145052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCA CGCACGAACC GGTCGATCTC ACCAATTGCG ACCGTGAGCC GATCCACCAG CTCGGCTCCG TCCAGCCCTT CGGCTTTCTA TTGGCCGCAT CCTCAGACTG GATTGTCATG CGCGCCTCCG CAAATCTGGC GGAGTTTATC GGAGTGACAG AGGCCAACGC GATCGGCCGT CCTGTTCTCT CTCTGATTAC ACCCGAAGCA CTCCACACAA TCCGCAACAA GCTTACCACG TTGCGCGGTT CGGACGTCGT CGAGCGCATT TTCGGCATTG CTCTGACGTC CGATCAAAAC AGGTTCGACC TTGCCGTGCA CCTGAACGGA GGTCAGGTCA TCATCGAAGG CGAGCGCTGC CAGGAAGACA GGCACGACGC CGCGTCACTC TCGATGCGCA GCATGATGTC CCGCCTCGAT CACACGGAAA CACTGGAAGC TTTCTTCCGT GAGGGTGCAA GACAAGCGCG GGCGCTTACC GGTTTCGATC GGGTCATGGT CTATCGTTTC GACGAAAGCG GTTCCGGCGA AGTCGTGGCG GAAGCCGCCC GGGCCGGCAT CGGATCGTTC CTCGGGCTGC ACTACCCGGC TTCCGACATT CCGGTACAGG CGCGCGCGCT TTATCAGCGC AACCTGTTCC GTATCATTGC TGATGTCGAC GCCGTCCCGG TCCCGATCCT GCCGCCGCTC GATGAGCACG GCCGGCCGCT CGACCTCTCC ATGTCGGTCT TGCGTTCGGT CTCGCCGATC CACATCGAAT ATTTGAAAAA CATGGGCGTT GGCGCTTCGC TCTCCATATC GATCGTTGTC GACGGTAGGC TCTGGGGCCT GTTTGCCTGC CATCACTACG GCCCGCGTCT GCCTTCGGCC CAAAGCCGCT CCACTGCCGA ACTCTTCGGC CAGATGTTTG CGTCGCGCCT TGAAAGCCGC GAACGGCGAC TGGCTCTCGA CTACGAGACC AAGGCGCGCC GCATTGCCGA CCGGCTTCTC ACCTCCGTCG CAGACAATGC GAGCCTGCTC GACGATCCGG CCTGGCTGAT CGAGGCGCTC GCCGACGCCA TTCCTGCCGA CGGGATCGGC GTCTGGATCA ACGGCCGGCT GGCACTTGCC GGTAACGGGC CGAATGAGAG AGGCTTCGCA GCCCTCGTCC GCCACCTCAA CCGCAACGCC GCCGGCCGCA TCTATGCCGT GGACAGGCTC GCGGAAACCT ATCTGGATCT TGAGGTCGAC GATGCTGTAG CAGGCATGCT CGCCATTCCG ATCTCGCGTT CGCCGCGCGA TTATGTGGTG CTTTTCCGTC AGGAATTAGT GCGCACAGTT CGCTGGGGCG GCGATCCGTA CAAGCCGGTG GAATACGGTC CGAATGGCCC GCGGCTGACG CCGCGCAAGA GTTTCGAAGC CTGGTCGGAA CTGGTGCGCG GCCGCTCCCT CCCCTTCACC GAGGCCGAGC GCCGTGTCGC CGAAACGATC CGCGTCACAT TGATCGAGGT GGTGTTGCGC CTCACCGACG AGGTCAGTAT GGCGCGCCAG ACGGCAAACG AGCGCCAGGA ACTGCTGATT GCCGAGCTGA ACCACCGCGT CCGCAACATA TTGAGCCTTA TCACCGGTAT CATCCGGCAG TCGCAGGCAA CGTCGGTCGG CCTTGGCGAC TACATCCGCC AGCTCGAGGG CCGCATCCAG TCGCTCGCCC GCGCCCATGA CCAGATCACC CGCGATCACT GGGCGCCTGC TTCGCTCCGG CAATTGCTGC TGGCAGAGAC CGCCGCCTAT CTCGGGAAAA ATGCGCAACG CATCCAGATG GGCGGCGAGG ATGTACTGCT GGAACCGCAC GCCTTTTCCA CCGCCGCCCT TGTCTTCCAC GAGCTGATGA CCAACAGCGC CAAATATGGC AGCCTTTCCG GCACCGGCAG CGGCACGGTC CAACTTGGCT GGCACCGCGA CGACGAGGGC AATCTGCGCA TTGGCTGGCG CGAAAAGCAT GGTCCGCCCG TCATCGAACC CACCCGCCAT GGCTTCGGTT CGACGATCAT CCGCCGCTCG ATCCCCTATG ACCTCGGCGG CAAGGCGGAG GTCCGCTACC TCAGGGATGG GCTCGAGGCC GATTTCTGCA TTCCGGCGCG ACATGTCGTC GGCCCGACCA GCGAACGGTC AAATCCGGTT CCGATCGGAG CAACCGAACC CAAGACCAAT CCCGACGATC AACCGCTTTC CGGCCTGAAC GTGCTGCTGG TGGAAAACAA TCTGATCATC GCCATGGATG GGGAGGATAT CCTGCGCCGC CTGGGCGCCG ACGTCGCAAC GGCACCAAGT GTCACTGAGG CGATGGAAAT CCTGGCCGGC CAGTCCTTCG ATCTGGCGCT TCTCGATGTC AATCTTGGCG ATGAGACGAG TTTCGGGATT GCCGACCGGC TGGCAGCTGA TGGCGTGCCC TTCGTTTTTG CCACGGGGTA TGGGGAAGGC ATCGCCCAGG CAAACAGCCA CTCGGATGCA CCCGTGCTGC AGAAGCCTTA TACGATGGAA GGCGTGACGG ATATTCTTGC CCGGGTACAG CTTCGCAGGA GCGGGTAA
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Protein sequence | MNGTHEPVDL TNCDREPIHQ LGSVQPFGFL LAASSDWIVM RASANLAEFI GVTEANAIGR PVLSLITPEA LHTIRNKLTT LRGSDVVERI FGIALTSDQN RFDLAVHLNG GQVIIEGERC QEDRHDAASL SMRSMMSRLD HTETLEAFFR EGARQARALT GFDRVMVYRF DESGSGEVVA EAARAGIGSF LGLHYPASDI PVQARALYQR NLFRIIADVD AVPVPILPPL DEHGRPLDLS MSVLRSVSPI HIEYLKNMGV GASLSISIVV DGRLWGLFAC HHYGPRLPSA QSRSTAELFG QMFASRLESR ERRLALDYET KARRIADRLL TSVADNASLL DDPAWLIEAL ADAIPADGIG VWINGRLALA GNGPNERGFA ALVRHLNRNA AGRIYAVDRL AETYLDLEVD DAVAGMLAIP ISRSPRDYVV LFRQELVRTV RWGGDPYKPV EYGPNGPRLT PRKSFEAWSE LVRGRSLPFT EAERRVAETI RVTLIEVVLR LTDEVSMARQ TANERQELLI AELNHRVRNI LSLITGIIRQ SQATSVGLGD YIRQLEGRIQ SLARAHDQIT RDHWAPASLR QLLLAETAAY LGKNAQRIQM GGEDVLLEPH AFSTAALVFH ELMTNSAKYG SLSGTGSGTV QLGWHRDDEG NLRIGWREKH GPPVIEPTRH GFGSTIIRRS IPYDLGGKAE VRYLRDGLEA DFCIPARHVV GPTSERSNPV PIGATEPKTN PDDQPLSGLN VLLVENNLII AMDGEDILRR LGADVATAPS VTEAMEILAG QSFDLALLDV NLGDETSFGI ADRLAADGVP FVFATGYGEG IAQANSHSDA PVLQKPYTME GVTDILARVQ LRRSG
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