| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3289 |
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| Symbol | |
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| ID | 8014174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 3288845 |
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| End bp | 3291412 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644825848 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002977075 |
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| Protein GI | 241205979 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.363327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.145052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCA CGCACGAACC GGTCGATCTC ACCAATTGCG ACCGTGAGCC GATCCACCAG
CTCGGCTCCG TCCAGCCCTT CGGCTTTCTA TTGGCCGCAT CCTCAGACTG GATTGTCATG
CGCGCCTCCG CAAATCTGGC GGAGTTTATC GGAGTGACAG AGGCCAACGC GATCGGCCGT
CCTGTTCTCT CTCTGATTAC ACCCGAAGCA CTCCACACAA TCCGCAACAA GCTTACCACG
TTGCGCGGTT CGGACGTCGT CGAGCGCATT TTCGGCATTG CTCTGACGTC CGATCAAAAC
AGGTTCGACC TTGCCGTGCA CCTGAACGGA GGTCAGGTCA TCATCGAAGG CGAGCGCTGC
CAGGAAGACA GGCACGACGC CGCGTCACTC TCGATGCGCA GCATGATGTC CCGCCTCGAT
CACACGGAAA CACTGGAAGC TTTCTTCCGT GAGGGTGCAA GACAAGCGCG GGCGCTTACC
GGTTTCGATC GGGTCATGGT CTATCGTTTC GACGAAAGCG GTTCCGGCGA AGTCGTGGCG
GAAGCCGCCC GGGCCGGCAT CGGATCGTTC CTCGGGCTGC ACTACCCGGC TTCCGACATT
CCGGTACAGG CGCGCGCGCT TTATCAGCGC AACCTGTTCC GTATCATTGC TGATGTCGAC
GCCGTCCCGG TCCCGATCCT GCCGCCGCTC GATGAGCACG GCCGGCCGCT CGACCTCTCC
ATGTCGGTCT TGCGTTCGGT CTCGCCGATC CACATCGAAT ATTTGAAAAA CATGGGCGTT
GGCGCTTCGC TCTCCATATC GATCGTTGTC GACGGTAGGC TCTGGGGCCT GTTTGCCTGC
CATCACTACG GCCCGCGTCT GCCTTCGGCC CAAAGCCGCT CCACTGCCGA ACTCTTCGGC
CAGATGTTTG CGTCGCGCCT TGAAAGCCGC GAACGGCGAC TGGCTCTCGA CTACGAGACC
AAGGCGCGCC GCATTGCCGA CCGGCTTCTC ACCTCCGTCG CAGACAATGC GAGCCTGCTC
GACGATCCGG CCTGGCTGAT CGAGGCGCTC GCCGACGCCA TTCCTGCCGA CGGGATCGGC
GTCTGGATCA ACGGCCGGCT GGCACTTGCC GGTAACGGGC CGAATGAGAG AGGCTTCGCA
GCCCTCGTCC GCCACCTCAA CCGCAACGCC GCCGGCCGCA TCTATGCCGT GGACAGGCTC
GCGGAAACCT ATCTGGATCT TGAGGTCGAC GATGCTGTAG CAGGCATGCT CGCCATTCCG
ATCTCGCGTT CGCCGCGCGA TTATGTGGTG CTTTTCCGTC AGGAATTAGT GCGCACAGTT
CGCTGGGGCG GCGATCCGTA CAAGCCGGTG GAATACGGTC CGAATGGCCC GCGGCTGACG
CCGCGCAAGA GTTTCGAAGC CTGGTCGGAA CTGGTGCGCG GCCGCTCCCT CCCCTTCACC
GAGGCCGAGC GCCGTGTCGC CGAAACGATC CGCGTCACAT TGATCGAGGT GGTGTTGCGC
CTCACCGACG AGGTCAGTAT GGCGCGCCAG ACGGCAAACG AGCGCCAGGA ACTGCTGATT
GCCGAGCTGA ACCACCGCGT CCGCAACATA TTGAGCCTTA TCACCGGTAT CATCCGGCAG
TCGCAGGCAA CGTCGGTCGG CCTTGGCGAC TACATCCGCC AGCTCGAGGG CCGCATCCAG
TCGCTCGCCC GCGCCCATGA CCAGATCACC CGCGATCACT GGGCGCCTGC TTCGCTCCGG
CAATTGCTGC TGGCAGAGAC CGCCGCCTAT CTCGGGAAAA ATGCGCAACG CATCCAGATG
GGCGGCGAGG ATGTACTGCT GGAACCGCAC GCCTTTTCCA CCGCCGCCCT TGTCTTCCAC
GAGCTGATGA CCAACAGCGC CAAATATGGC AGCCTTTCCG GCACCGGCAG CGGCACGGTC
CAACTTGGCT GGCACCGCGA CGACGAGGGC AATCTGCGCA TTGGCTGGCG CGAAAAGCAT
GGTCCGCCCG TCATCGAACC CACCCGCCAT GGCTTCGGTT CGACGATCAT CCGCCGCTCG
ATCCCCTATG ACCTCGGCGG CAAGGCGGAG GTCCGCTACC TCAGGGATGG GCTCGAGGCC
GATTTCTGCA TTCCGGCGCG ACATGTCGTC GGCCCGACCA GCGAACGGTC AAATCCGGTT
CCGATCGGAG CAACCGAACC CAAGACCAAT CCCGACGATC AACCGCTTTC CGGCCTGAAC
GTGCTGCTGG TGGAAAACAA TCTGATCATC GCCATGGATG GGGAGGATAT CCTGCGCCGC
CTGGGCGCCG ACGTCGCAAC GGCACCAAGT GTCACTGAGG CGATGGAAAT CCTGGCCGGC
CAGTCCTTCG ATCTGGCGCT TCTCGATGTC AATCTTGGCG ATGAGACGAG TTTCGGGATT
GCCGACCGGC TGGCAGCTGA TGGCGTGCCC TTCGTTTTTG CCACGGGGTA TGGGGAAGGC
ATCGCCCAGG CAAACAGCCA CTCGGATGCA CCCGTGCTGC AGAAGCCTTA TACGATGGAA
GGCGTGACGG ATATTCTTGC CCGGGTACAG CTTCGCAGGA GCGGGTAA
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| Protein sequence | MNGTHEPVDL TNCDREPIHQ LGSVQPFGFL LAASSDWIVM RASANLAEFI GVTEANAIGR
PVLSLITPEA LHTIRNKLTT LRGSDVVERI FGIALTSDQN RFDLAVHLNG GQVIIEGERC
QEDRHDAASL SMRSMMSRLD HTETLEAFFR EGARQARALT GFDRVMVYRF DESGSGEVVA
EAARAGIGSF LGLHYPASDI PVQARALYQR NLFRIIADVD AVPVPILPPL DEHGRPLDLS
MSVLRSVSPI HIEYLKNMGV GASLSISIVV DGRLWGLFAC HHYGPRLPSA QSRSTAELFG
QMFASRLESR ERRLALDYET KARRIADRLL TSVADNASLL DDPAWLIEAL ADAIPADGIG
VWINGRLALA GNGPNERGFA ALVRHLNRNA AGRIYAVDRL AETYLDLEVD DAVAGMLAIP
ISRSPRDYVV LFRQELVRTV RWGGDPYKPV EYGPNGPRLT PRKSFEAWSE LVRGRSLPFT
EAERRVAETI RVTLIEVVLR LTDEVSMARQ TANERQELLI AELNHRVRNI LSLITGIIRQ
SQATSVGLGD YIRQLEGRIQ SLARAHDQIT RDHWAPASLR QLLLAETAAY LGKNAQRIQM
GGEDVLLEPH AFSTAALVFH ELMTNSAKYG SLSGTGSGTV QLGWHRDDEG NLRIGWREKH
GPPVIEPTRH GFGSTIIRRS IPYDLGGKAE VRYLRDGLEA DFCIPARHVV GPTSERSNPV
PIGATEPKTN PDDQPLSGLN VLLVENNLII AMDGEDILRR LGADVATAPS VTEAMEILAG
QSFDLALLDV NLGDETSFGI ADRLAADGVP FVFATGYGEG IAQANSHSDA PVLQKPYTME
GVTDILARVQ LRRSG
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