Gene Rleg_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3287 
Symbol 
ID8014172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3287274 
End bp3288173 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content64% 
IMG OID644825846 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002977073 
Protein GI241205977 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.150197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.141874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGC TGAAGGGTAT CTCGATCTTT GTCGAAGCCG TCGAGGCAGG TGGCTTTTCG 
GCTGCCGCCG AGCGGCTCCA TCTCACGCGT TCGGCGGTCG GCAAGACGAT CGCACGTCTG
GAGCAGCGTC TCGGCGTGCG CCTCTTCAAC CGCACGACAC GCATGCAGAG CCTTACCGAG
GAAGGCCGCT TCTTCTACGA GCGCTGCCTG CGGGCGGTCG AGGAAATCCG CCTCGGGGAA
GCCATGCTGG AATCCGGCCG GCGTGACGTG CGCGGCCGGC TGCGCATCTC GATGCCCGTG
CTTTTCGGCC GCCACTGCAT CGCGCCGACC CTCGCACGCC TGCTCGATGA ACATCCGAAC
CTCGAACTCG ACCTTTCCTT CAACGACCGT ATCGTCGACC TGCTCGAAGA CGGCTTCGAT
CTTGTCATTC GCAACGGGCC GTTGAAGGAC AATCCGGATC TGATGGCCCG GGCGATCGCC
CGCCAGCGCA TGACCGTCTG CGCATCGCCC GCCTATCTGG AAAAACATGG CGAGCCGCAA
ACGGTGTTCG ATATTCCGCG GCATGAAGGC ATCGTCTACA GGCGGGGCGA TGACGACAAG
GGTTGGATAT TTCCGACTGC GGCCGATCCC GGGCGGCGGC TGGTGCCAAA GGCGCGACTG
CGGCTCGACG ACCTCGCTTC GATTTCCGAT GCGGCCGTCG CCGGACGCGG TCTTGCCTGG
CTGCCATGCT GGCTGGTCCG CGAGGAGGTG CTGGCAGGCC GGCTCATTCA GGTATTGAAG
CAGGAACCGG CCAATGTCTT CGATGCCCAT GCCGTGTGGC TGCGCTCCCC GGTCATGCTG
CCGAAGGTGC GGCTCGCGAT CGATACGCTC GCCGCCAGAC TGCCGGCAAT GATGGGCTGA
 
Protein sequence
MERLKGISIF VEAVEAGGFS AAAERLHLTR SAVGKTIARL EQRLGVRLFN RTTRMQSLTE 
EGRFFYERCL RAVEEIRLGE AMLESGRRDV RGRLRISMPV LFGRHCIAPT LARLLDEHPN
LELDLSFNDR IVDLLEDGFD LVIRNGPLKD NPDLMARAIA RQRMTVCASP AYLEKHGEPQ
TVFDIPRHEG IVYRRGDDDK GWIFPTAADP GRRLVPKARL RLDDLASISD AAVAGRGLAW
LPCWLVREEV LAGRLIQVLK QEPANVFDAH AVWLRSPVML PKVRLAIDTL AARLPAMMG