Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3271 |
Symbol | |
ID | 8014159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3271881 |
End bp | 3272993 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644825830 |
Product | transport system permease protein |
Protein accession | YP_002977057 |
Protein GI | 241205961 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00536194 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCCCTGC CGCAAGCCAT GATGGAACAA AGGCGACGAT TCCCGATGGC GGACATCCGC GACATCAGGC AGGCGGGCGA CAGGACGCGG CTCGCCTTGC TGGCGATCGC GTTGCTCGTC GTCGGCTCGG TCTTCTCGAT GCTGTTTTCG GTGACGACAG GCGCCTCGGA TGCCTCGATC CTCGACGTCA TCAGCAACAT GGCCGGTTCC GAGACGGCGC TCAGCACGCG TGACCGGATC ATCATCTTCG ATATCCGCCT GCCAAGGGCG ATCCTCGGTT TCCTGATCGG CGCTTCGCTG GCCGTTTCCG GCACGGTGAT GCAAGGCCTG TTCCGCAATC CGCTGGCCGA TCCCGGCCTC GTCGGCGTCT CCTCCGGCGC AAGTTTTGGC GCGGTTGCCA TGATCGTCCT CGGTGGCGGT CTCGCAGCGC CGGTCGAGGC GCTTCTCGGC ATCTACGCTC TGCCGACAGC CGCTTTCGGC GGCGGCCTCG TCACGACGCT GCTGCTCTAC AGGATCGCCA CCCGTCACGG ACAGACCTCG GTGGCGACGA TGCTGCTTGC CGGCATCGCG CTCGGCGCGC TCGCCCTCGC CATCACGGGA CTGCTGATCT ACATGGCCAA CGACCAGCAG CTGCGCGACC TGACCTTCTG GAGCATGGGC TCGCTTGCCG GCGCCACGTG GACGAAGATC GCCGCCGCCA GCCCGATCAT CCTGTTGTCC TTTACCGCCC TGCCCTTCAT GGCCCGCGGC CTCAATGCCA TCACGCTCGG TGAGGCGGCC GCCTTTCATA TGGGCGTGCC GGTGCAGCGG CTGAAGAATG TCGCGATCGT CGGTGTCGCT GCGGCGACCG GCGCGTCCGT CGCCGTCAGC GGCGGCATCG GTTTCGTCGG GATCGTCGTG CCGCATATCC TGCGCATGGC GATCGGCCCC GACCATCGTT TCCTGCTGCC GGCCGCAGCT CTTCTCGGCG GCTCCCTGCT GATCTTCGCA GATGTCTTGG CGCGCACCCT GGTCGCCCCG GCCGAGCTGC CGATCGGCAT CATCACGGCG GCGGTCGGCG GGCCGTTCTT CCTGTGGATC CTGCTGAGGC AGCGTTCGCG CCTTGCCCTG TGA
|
Protein sequence | MALPQAMMEQ RRRFPMADIR DIRQAGDRTR LALLAIALLV VGSVFSMLFS VTTGASDASI LDVISNMAGS ETALSTRDRI IIFDIRLPRA ILGFLIGASL AVSGTVMQGL FRNPLADPGL VGVSSGASFG AVAMIVLGGG LAAPVEALLG IYALPTAAFG GGLVTTLLLY RIATRHGQTS VATMLLAGIA LGALALAITG LLIYMANDQQ LRDLTFWSMG SLAGATWTKI AAASPIILLS FTALPFMARG LNAITLGEAA AFHMGVPVQR LKNVAIVGVA AATGASVAVS GGIGFVGIVV PHILRMAIGP DHRFLLPAAA LLGGSLLIFA DVLARTLVAP AELPIGIITA AVGGPFFLWI LLRQRSRLAL
|
| |