Gene Rleg_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3271 
Symbol 
ID8014159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3271881 
End bp3272993 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content67% 
IMG OID644825830 
Producttransport system permease protein 
Protein accessionYP_002977057 
Protein GI241205961 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00536194 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCCTGC CGCAAGCCAT GATGGAACAA AGGCGACGAT TCCCGATGGC GGACATCCGC 
GACATCAGGC AGGCGGGCGA CAGGACGCGG CTCGCCTTGC TGGCGATCGC GTTGCTCGTC
GTCGGCTCGG TCTTCTCGAT GCTGTTTTCG GTGACGACAG GCGCCTCGGA TGCCTCGATC
CTCGACGTCA TCAGCAACAT GGCCGGTTCC GAGACGGCGC TCAGCACGCG TGACCGGATC
ATCATCTTCG ATATCCGCCT GCCAAGGGCG ATCCTCGGTT TCCTGATCGG CGCTTCGCTG
GCCGTTTCCG GCACGGTGAT GCAAGGCCTG TTCCGCAATC CGCTGGCCGA TCCCGGCCTC
GTCGGCGTCT CCTCCGGCGC AAGTTTTGGC GCGGTTGCCA TGATCGTCCT CGGTGGCGGT
CTCGCAGCGC CGGTCGAGGC GCTTCTCGGC ATCTACGCTC TGCCGACAGC CGCTTTCGGC
GGCGGCCTCG TCACGACGCT GCTGCTCTAC AGGATCGCCA CCCGTCACGG ACAGACCTCG
GTGGCGACGA TGCTGCTTGC CGGCATCGCG CTCGGCGCGC TCGCCCTCGC CATCACGGGA
CTGCTGATCT ACATGGCCAA CGACCAGCAG CTGCGCGACC TGACCTTCTG GAGCATGGGC
TCGCTTGCCG GCGCCACGTG GACGAAGATC GCCGCCGCCA GCCCGATCAT CCTGTTGTCC
TTTACCGCCC TGCCCTTCAT GGCCCGCGGC CTCAATGCCA TCACGCTCGG TGAGGCGGCC
GCCTTTCATA TGGGCGTGCC GGTGCAGCGG CTGAAGAATG TCGCGATCGT CGGTGTCGCT
GCGGCGACCG GCGCGTCCGT CGCCGTCAGC GGCGGCATCG GTTTCGTCGG GATCGTCGTG
CCGCATATCC TGCGCATGGC GATCGGCCCC GACCATCGTT TCCTGCTGCC GGCCGCAGCT
CTTCTCGGCG GCTCCCTGCT GATCTTCGCA GATGTCTTGG CGCGCACCCT GGTCGCCCCG
GCCGAGCTGC CGATCGGCAT CATCACGGCG GCGGTCGGCG GGCCGTTCTT CCTGTGGATC
CTGCTGAGGC AGCGTTCGCG CCTTGCCCTG TGA
 
Protein sequence
MALPQAMMEQ RRRFPMADIR DIRQAGDRTR LALLAIALLV VGSVFSMLFS VTTGASDASI 
LDVISNMAGS ETALSTRDRI IIFDIRLPRA ILGFLIGASL AVSGTVMQGL FRNPLADPGL
VGVSSGASFG AVAMIVLGGG LAAPVEALLG IYALPTAAFG GGLVTTLLLY RIATRHGQTS
VATMLLAGIA LGALALAITG LLIYMANDQQ LRDLTFWSMG SLAGATWTKI AAASPIILLS
FTALPFMARG LNAITLGEAA AFHMGVPVQR LKNVAIVGVA AATGASVAVS GGIGFVGIVV
PHILRMAIGP DHRFLLPAAA LLGGSLLIFA DVLARTLVAP AELPIGIITA AVGGPFFLWI
LLRQRSRLAL