| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3266 |
|---|
| Symbol | |
|---|
| ID | 8014155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3267585 |
|---|
| End bp | 3268940 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644825825 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_002977052 |
|---|
| Protein GI | 241205956 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0913504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTT CAGCGAAGAC CAGATCGAGA CAGGTGCTCA TCGGGGAGCC GGACGCTGAC
GGCGGTCTGA ACGACAACAA CATGCATCCC GGCCACGAGC TTTCCGACCT GCGCAATGTG
CAGCGGCAGC CGGCTGGCGA GGCGGTGGTC CATTATGCGC GTTTCGCGCA GATACCCTCC
TTTCCCGATC ATCCGGAGGC CGAACCGACA GCCTCTGTTC CTGCGCCGCC GATGGATGCA
GCGGTAGAAA AGCAGGGAGA CGAGAAGGCA CCGGTGCGGA GACGGGTGGC GCTGACGTAC
ATCTGCTCGC TGATCTTTCA CGCGACACTG GCGGCTGTGC TGCTGATTGC TTTCCCCAAA
GCGCCGGAGG AGGCAATCGA AGAAGCCGGT CAGGCGATGA GCGTCGTCAT GTATGGCGAT
TCCGATATCG ACCAGGCTGC TGCTGGCGAG ACCGAAACGA CCATCCAGCA GGAAATCATT
CCCGAAGAAG TGCAGCCTGA CACGATCCAG CCGACGCAAA CGGCGGAAGT TCAACCGGAA
ACCGTGCAGC CGACCGAAGT TTCGCCCTTC GAAGCGCAGG ATCCTATTCA GCAGGCGCCG
GCACCGGAAG TGACGCGCGT TTCGCCCGAA ACGGCCGCGG CCGTCGAGCC GGAGATTCTG
GTGTCCGAGG TGCCGGCGGA GGAGTCCGTC GCGCAGCCAA TGTCGACGGT TGTTCCCGAA
CAGCAGCAGG TGCCGCTCGA CGCAGTGCCG CCATCCGAGG TACAGCCGAC TGCGGTCCAG
CCGAGCGAGG TGCAGCCTGC GGAAACCCCG GCGGAAGTCG CGGAGGAGAC TCCACAGGGG
GTGAAGCCCA TAGAAACGGC AGAAATCCAG CCGAAACCGG AACAGCCGCC CGAGGTTGTA
ACGCCGACGC CAAAGCCGAA AGTGGCACAG GAGAAGCCCA AGCCGGTCGA GAAGAAGCGT
CCGCCGCAGA AGGCCGCTGG CGACAAGGGG GAGGGGCAGC AGACTTCAAC GCGTGGCGTT
GCCGAAGGCA ATTCATCGGC GCAATCCGAC AACAGTTCGC AGGCCGCCAA CGGCAATAAC
GGGGTGGGGA CGGCCGCGAC CGCAAACTAT AAAGGCAAGG TCCGTAGCCG TATTCGGCGT
GCGATCAGGA AGCCCCGAGG TGTCGAAGGC AGCGTTGTTG TCACCTTCTC AGTCAACGGC
GGCGGCGGCC TGACCTCCGC TCGTGTCTCG CGTGGGTCCG GCGTTCCGGA GATCGATCAG
CTTGCTCTCG ATGCGGTGCG TCGTGCGGCA CCCTTCAGCC CCCCGCCCGG TGGGCAGGCG
ATGACCATGT CAGCGCCTAT CGAGATCGTG CCATGA
|
|---|
| Protein sequence | MAISAKTRSR QVLIGEPDAD GGLNDNNMHP GHELSDLRNV QRQPAGEAVV HYARFAQIPS
FPDHPEAEPT ASVPAPPMDA AVEKQGDEKA PVRRRVALTY ICSLIFHATL AAVLLIAFPK
APEEAIEEAG QAMSVVMYGD SDIDQAAAGE TETTIQQEII PEEVQPDTIQ PTQTAEVQPE
TVQPTEVSPF EAQDPIQQAP APEVTRVSPE TAAAVEPEIL VSEVPAEESV AQPMSTVVPE
QQQVPLDAVP PSEVQPTAVQ PSEVQPAETP AEVAEETPQG VKPIETAEIQ PKPEQPPEVV
TPTPKPKVAQ EKPKPVEKKR PPQKAAGDKG EGQQTSTRGV AEGNSSAQSD NSSQAANGNN
GVGTAATANY KGKVRSRIRR AIRKPRGVEG SVVVTFSVNG GGGLTSARVS RGSGVPEIDQ
LALDAVRRAA PFSPPPGGQA MTMSAPIEIV P
|
|---|
| |