Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3260 |
Symbol | |
ID | 8014149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3264625 |
End bp | 3265188 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644825819 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002977046 |
Protein GI | 241205950 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.323175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACG CTCATCATCG CAAGAAACAG CCCGTGCTCG TGCGCCAGCA GTTGCTGGAG GTCGCCGCGC GCCTTGCTGC CAGCGACGGC ATGGCCGCCG TCACGCTCGA TGCGGTTTCC GCTGCGTCCA GCGTCAGCAA GGGCGGGCTG CTGCATCACT TCCCGACGAA GAATGCGCTG CTCGATGCGC TGTTCGAGAG CCTGCTCGAA AAGTTCGACG CCGATATAGA GGAACTGATG CGCGGCGATC CGCTGCCGCA GGGGCGCTTC ACCCGCGCTT ATCTGAGGGC GGTATCCGGT CTCAAGGAGC GTCCCGACGA TTCCAGGAGT TGGACGCAGG TGACGATCGC GCTTCTTGCC GAACCCCGGC TGCGTCTTCG TTGGCGCCAA TGGGTGCAGG CGCGGGCGGA GGAATATATC GGCACAGACT CCTCCCTCGA CGCGCAAGTC GTGCGTTTCG CCGCCGACGG TCTTTGGTTC GCAGATACGT TGGAAAGCCA TGATATCAAC GGCGTTGTGA GGCGGGATCT TATCGATCGC CTTGTCGAAC TGACCGGCAA GTAA
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Protein sequence | MSNAHHRKKQ PVLVRQQLLE VAARLAASDG MAAVTLDAVS AASSVSKGGL LHHFPTKNAL LDALFESLLE KFDADIEELM RGDPLPQGRF TRAYLRAVSG LKERPDDSRS WTQVTIALLA EPRLRLRWRQ WVQARAEEYI GTDSSLDAQV VRFAADGLWF ADTLESHDIN GVVRRDLIDR LVELTGK
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