Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3230 |
Symbol | |
ID | 8014122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3234112 |
End bp | 3236388 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644825791 |
Product | exopolysaccharide transport protein family |
Protein accession | YP_002977018 |
Protein GI | 241205922 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTATCGC CAGATAAACT TACGCCGCGT ATCGACCCCT CCCGCGATAC CGGAAATGAT GCTGATTTCA TCGATTTCGA CAAGCTCATC GCAATCGCCC GCCGACAGTG GCGGATGGTT GCGGCGTGCG GTTTCGCCTT TGCCATTCTC GGCATTGTGT ATGTCTTGAC TTCGGTGCCT GTCTACACCG CCGACACCAG CGTGCTGATC GACCGCAGCG ATAGTCAGGT GATCAACCAG CTGGCGGCGT TCGGCCAGAT GGACGATGAC GAAGGTACTG TCCTCAGTCA GGTCGAGCTG TTGAAGTCCG ACACCATCGC CTATGCTGTT GTCGACAAGC TGAAACTCGT CGACAATCCG GAGTTCATGG GACCGAAAAG CTCGCTTTTT TCTGTTTCAA CGTTGAAATC CTTTATGAAT TTTCGGTCGT GGTTTGCCGA TGACGCAGCC GTCGCACCTG ATCCGGAAAT GAGGCGGCGA GGCGCTGCCG AGACTGTCGC AGGCAATATC GATGTCGAAC GCGTCGGCCG CTCCTACGTC CTCGATGTCA GTTATACAGC GCAGTCGCCG GACCTAGCGC GTGATATCGC GGCTGGGATC GCCGACGTCT ATCTGGTCGA CAAGCTCAAT TCGAAATACG AGGCGACGCG CCGGGCCGGC CAATGGCTGC AGGAGCGCAT CGAAGAACTC CGGCAGCAGG CGCTGGACAC CGACCTTGCG GTTCAGAAAT TCCGCGGCGA GCATGGGCTT GTCGAGGCCG GATCCGGTAC GCTGATCAGC GAGCAGCAGC TTTCCGAGAT CAATACGCAA TTGATCAATG CGCAGGCCGA GACGGCAAAG GCCGAGGCAC GGTATGCGCG CGTCAAGTCG ATCATCGACG CCAAGCAGAC CGATGCGATC GTCACGGATG TGCTCGACAG CTCCATTTCC AACGACCTGC GCAAGAAATA TCTGGAGGCT TCCAAGCTTG AGACCGAAAT TGAGGCGCGG CTCGGTCCCG ATCACGTCCA GGCGGTTCGG CTTCGTGCGG AAATGGAAGA ATATAAAAGG CTCATGTTCG ATGAGTTGAA CCGCATCGCC GAGAGCTACC AAAGCGAGCT GCAGGTCGCA AAATCGCGGG AAAACTCTTT GCGCGACAGT GTTACACAGG CGACGGGCGT AGCCGCAACG GCTGGCGAAA CGCAGGTACA GCTTCGCGAG CTCGAGCGCA CGCGCGATAC CTACAAGAAT CTCTATCAGA GCTTCTTGAC GCGCTACCAG GAAGCAATTC AGCAGCAGAG CTTTCCGATT ACCGCTGCGC GCATCATCAC GACGGCGGAG ACGCCGACGA AGCCGAGCGC TCCGAAGAGA GCTCTCGTTG TTGCTTTCGC GATGTTCGTA GGATGTGCAT TTGGCAGTGG TATAGCGGCC TTCCGCGAAT TCCGAGATCG GTTCTTCCGC ACCGGCGATG ATGTCCGGGA CGTGCTTGAT GTCGAGTCTC TCGGGGTCAT GCCGCTGATT GAAAATAACG TCGACGATCC GACGCTCGTT GATCCCAGCA ATCCGCGAAG CATCGCCAGG GGCGGAAAGA CGACGACCTA TGTCGAGGAG CATCCACTCT CGGCATTTGC CGAGACGCTT CGAAGCGCCA AGATTGCGAT CGACCTCAGT GCTGCCGATC AGCGCTGCAA GGTCATCGGC GTCGTGTCGA GCTTGCCTGG CGAGGGGAAG TCGACGACAT CCATCAATTT CGCCAAGCTT CTGGCAATGC AGGGTGCGCG TTGCCTGCTT ATCGATGGCG ATATGCGCAA TCCCGGTGCC ACCCGGGCGA TCGGCCGCCA TGCCGAGGCC GGCTTGCTCG AGGCGATCGT CGACAGCCGT CCGCTCAAGG ACCTGATCCT TCTCGATCCC AAGACAAAGC TGGCATTTTT GCCGACGGTG GCAAGGTATC GTGTTCCGCA TTCGTCGGAA CTGCTTGCCT CACGCGGCAT GGATCAGCTT CTTGAAACGG CGCGTCAAAG CTTCGACTAT ATTATCGTCG ACCTACCGCC CTTGGCGCCG GTCGTGGATG CGCGCGCTAT CAATTCGAAA CTCGATGCGG TGGTTTTCGT TATCGAGTGG GGAAAGACAT CGCGCAAGGT CGTGCAGTCG ACCCTGCTGT CCGAGCCGGA ACTCTATGCG AAGTGCGTCG GTACTATCTT GACCAAGGTC GACCCGTCGC AGATGAAACT CTACCGGACA TTCGGTTCGA GCGAATACTA TTATAAGCGT TATTCGCGAT ACTATACCGA AAGCTGA
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Protein sequence | MLSPDKLTPR IDPSRDTGND ADFIDFDKLI AIARRQWRMV AACGFAFAIL GIVYVLTSVP VYTADTSVLI DRSDSQVINQ LAAFGQMDDD EGTVLSQVEL LKSDTIAYAV VDKLKLVDNP EFMGPKSSLF SVSTLKSFMN FRSWFADDAA VAPDPEMRRR GAAETVAGNI DVERVGRSYV LDVSYTAQSP DLARDIAAGI ADVYLVDKLN SKYEATRRAG QWLQERIEEL RQQALDTDLA VQKFRGEHGL VEAGSGTLIS EQQLSEINTQ LINAQAETAK AEARYARVKS IIDAKQTDAI VTDVLDSSIS NDLRKKYLEA SKLETEIEAR LGPDHVQAVR LRAEMEEYKR LMFDELNRIA ESYQSELQVA KSRENSLRDS VTQATGVAAT AGETQVQLRE LERTRDTYKN LYQSFLTRYQ EAIQQQSFPI TAARIITTAE TPTKPSAPKR ALVVAFAMFV GCAFGSGIAA FREFRDRFFR TGDDVRDVLD VESLGVMPLI ENNVDDPTLV DPSNPRSIAR GGKTTTYVEE HPLSAFAETL RSAKIAIDLS AADQRCKVIG VVSSLPGEGK STTSINFAKL LAMQGARCLL IDGDMRNPGA TRAIGRHAEA GLLEAIVDSR PLKDLILLDP KTKLAFLPTV ARYRVPHSSE LLASRGMDQL LETARQSFDY IIVDLPPLAP VVDARAINSK LDAVVFVIEW GKTSRKVVQS TLLSEPELYA KCVGTILTKV DPSQMKLYRT FGSSEYYYKR YSRYYTES
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