| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3225 |
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| Symbol | |
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| ID | 8014118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 3226695 |
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| End bp | 3228002 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644825786 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002977013 |
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| Protein GI | 241205917 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAAAG TTATCAGTGA ATCGAAACGC TCCCTCAATC GGCATGTTGC CGTTGTCGGT
GTGTTGTCGA TAGCCCTCGT TTGCGGCATT GGCGGTTGGG CGGCGACGAC AGAGCTTTCG
AGCGCAGTCA TCGGCGAGGG CGTGATCGTC GTCGACGGTG ATGTCAAGAA GGTCCAGCAC
CTGACAGGCG GTATCGTGTC GGAATTGCTA GTCTCCGAAA ACGACCATGT GACGGCAGGG
CAGGTGCTGA TACGGCTCGA TGGGACGACG ACAAGAGCGA ACCTCTCGAT TGTCGAAAGC
ACGCTCGCTC AGCTTTATGC ACGCCGCGCC CGTCTGAAGG CGGAACGAAT CGGCGCCGAT
TCGTTCGAGG TCGAGGAAAA CATCAGCGAT CTGACTTCCA GCACCTCCGC GGCGAAGCTT
CTCGATGGCG AGCAGAAGTT GTTCGACAGT CGCAGGACGG CGCTTATCGG AATGAAGAGC
CAGTTGGCAT CGCGCAAGGA CCAACTGGGC GAGCAGGTAA AGGGGTTGGT CGTTCAGATC
AATGCCACCA ACGATGCCTT GGGCTTGATC GAACAGGAGC TCGAGGGCAT TGATACGCTC
TACAAGAAGG GGCTCGTCAC GCTTCAGCGT TTGAATACGC TCAAGCGCGC CCGCGCCGAT
CTCCAGGGCA ATAGCGGCCA GGAAATCGCA GCTAAGGCGG AGGCCGAGGG TAAGGCAATC
GAGATCGATC GCCAGTCGAT CCAGCTGGAT GAGGATCGTC GTTCGGAGAT CGCAAAGGAC
CTGACCGACG TCGAGGCGCA GATCGCCGAA TATGAAGAGC GCCGCGGAAC GGCGCTCGAT
CAGCTGCACC GTCTCGACAT TACCGCACCG TTGACGGGGC GAGTTCACGA ACTTTCGGTT
CACACCGTCA ATGGTGTCAT TGATCCCGGT CAGACGTTGA TGCTCGTCGT TCCCGAAAAT
AACGAACTTA TGGTCGAGGC GAAAGTCGCC ACCCGCGATA TTGACCAGGT TCACGTCGGC
CAGTCCGTCG ATGTGCGTTT CAGCGCTTTC GATCAACGCA CGACGCCTGA TGTGAGCGGT
GAGATTACCT CGATCGCGCC CGATATCGTC AAGGATGAGC GCACAGGCAT CAGTTACTAT
CCGCTGCGCG TCAAGCCGAA GGCTGAAAGC ATTGCCAGGA TGAAGACGAT AAAGCTCTAT
CCGGGCATGC CGGCCGAGGT CTTTATCAAG ATCGGCGACC GGACCGTAAT ATCCTATCTG
ACGAAGCCGC TGACCGATCA GATGCAGCAC GTATTTCGCC AGGAGTGA
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| Protein sequence | MNKVISESKR SLNRHVAVVG VLSIALVCGI GGWAATTELS SAVIGEGVIV VDGDVKKVQH
LTGGIVSELL VSENDHVTAG QVLIRLDGTT TRANLSIVES TLAQLYARRA RLKAERIGAD
SFEVEENISD LTSSTSAAKL LDGEQKLFDS RRTALIGMKS QLASRKDQLG EQVKGLVVQI
NATNDALGLI EQELEGIDTL YKKGLVTLQR LNTLKRARAD LQGNSGQEIA AKAEAEGKAI
EIDRQSIQLD EDRRSEIAKD LTDVEAQIAE YEERRGTALD QLHRLDITAP LTGRVHELSV
HTVNGVIDPG QTLMLVVPEN NELMVEAKVA TRDIDQVHVG QSVDVRFSAF DQRTTPDVSG
EITSIAPDIV KDERTGISYY PLRVKPKAES IARMKTIKLY PGMPAEVFIK IGDRTVISYL
TKPLTDQMQH VFRQE
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