Gene Rleg_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3197 
Symbol 
ID8014093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3199156 
End bp3200004 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content55% 
IMG OID644825760 
ProductABC-2 type transporter 
Protein accessionYP_002976987 
Protein GI241205891 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC AGCTCAAGGA TGATGCGCTT GATCGCGCGA AGCGACGGGA CCAATACTGG 
CGCCGTGATC AGTGGAAGTC CTTGATCCAC ATCTGTCTGC AATGGAACGA TTTGCTGTTA
GAACTTCTGG CACGCGATCT GAAGATGAGA TATCAACGGT CCGCAATTGG CCTCGGCTGG
TCCTTAATGC GGCCATTGAG CCAGCTGCTG GTTTTTTCGC TGATCTTTCG TCACGTTCTG
CCCCTAGATA TTCCCCATTA CACCACTTTC GTCTTTTCCG GCGTGTTGGC CTGGGGTTGG
CTCAGCACTG CGGTACCCGC AGCGACGACT TCCATAACCG GCAGCAGCGA ACTGGTGCGC
CGGCCGGGCT TTCCGGTCGG CATACTTCCT GTTGTCGCAG TCATCACACA AGCAGTGCAC
CTTCTGCTCG CTCTGCCACT CCTCTTCATC ATCTCGTTTA TCGAGACCGG GGGCCTGACT
TTGAGCGTCG TCGCACTTCC ACTCGTCTTC CTTGCGCAGG CGCTATTCAC GATGGGCCTG
TCCTATCTTG TTGCGATTGC GCATGTCCAC TTCCGGGATA CTCAACATTT GGTAGGCGTA
GTTTTGATGC TGGGTTTTTA CCTGACACCC GTGTTCTACA GCCCACTTAA GGCGAGTGAG
CCGATGGCGT TAATTCACAC CTTGAACCCG ATGGCCTGGA TTCTTGAGGG CTACCGCGCC
ATTTTCGTCG AACACGCGTG GCCTCCCGTT GATATCTATT GGAAGACTGC GCTGATTTCT
TTGCCGATGC TATTTGCTGG AATTTGGCTG GTCGAGCGTG GCAGCGCAAG CCTAGTGGAC
GAACTATGA
 
Protein sequence
MPEQLKDDAL DRAKRRDQYW RRDQWKSLIH ICLQWNDLLL ELLARDLKMR YQRSAIGLGW 
SLMRPLSQLL VFSLIFRHVL PLDIPHYTTF VFSGVLAWGW LSTAVPAATT SITGSSELVR
RPGFPVGILP VVAVITQAVH LLLALPLLFI ISFIETGGLT LSVVALPLVF LAQALFTMGL
SYLVAIAHVH FRDTQHLVGV VLMLGFYLTP VFYSPLKASE PMALIHTLNP MAWILEGYRA
IFVEHAWPPV DIYWKTALIS LPMLFAGIWL VERGSASLVD EL