Gene Rleg_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3196 
Symbol 
ID8015773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3197858 
End bp3199159 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content61% 
IMG OID644825759 
ProductABC transporter related 
Protein accessionYP_002976986 
Protein GI241205890 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAG GCGCCATCAC CGTCCACGAC GTCGGCAAGC GCTACCGTGC GCAAGGGGGT 
GCACGCTCCA CCACGTTGAA GGGTTACCTT TTGTCCGGAC GGTCCGTGGT GCCGTCGAAA
AGCTTTTGGG GCCTGCGCCA CATCAGCTTC GCGGTTGCGC CAGGGCAAGC TGTCGGCGTG
GTCGGGCTAA ACGGGGCCGG GAAGTCCACT TTGCTGCGTC TGATCGGCGG CGTTGGTCGT
CCCGACGAAG GGCAGATCAA GGTGATGGGT CGAATTGGCG CCTTGCTCGA CATCGGGGCG
GGCTTGACCG ACGATTTGAC GGGGCGCGAG AACATCTTCC TGCTGGGTGT TATCGCGGGA
ATGCGGCGGA CCGAGGTTGC CGAGCGGTTT GACGAGATTG TAGCCTTCGC CGAGCTGGAG
GCGGCCGTTG AGAACCCGGT TCGCAGTTAT AGCACCGGGA TGCGCATGCG CCTGGCATTC
GCCGTGGCAG TCCATGTGCG CCCGGACATC TTGCTTATCG ATGAGGCCCT CGCTGTAGGC
GACCAAGCCT TCCAGCAGAA GTGCATTGCA AGAGTGAAGG AGATACTGAA CGACGGCGCC
ACTATCTTCT TCGTGTCACA CGACGTCTCG CAGGTAAGAG AAATCTGCGA CTACGTGCTG
TTCCTGAGAG GCGGACGCGT CGTGGGCTAC GGACCAATCG ACGAAATGCT CCCACTTTAT
ACCTCGGCTG TCGAGGCGAA GGTCGCCAGT GTCCAGCACG AACCGTTCGG CGTTACAAAA
TTGCCCGTCG AGCTTGTGCC GCAGGTCAGC CGGTTCGGCA ATGGCGAACT CCAGATCACA
GCCGTAGCAT TGCTGAACGA GCAAGGCATG CCGACAAGTA CCATCGTTGC GGGCGACCGG
CTGTCGATTT CACTGACCTA TGTGGGCGCC ACCAGAGATC GCAACGCCGT TATCGTCATC
GGCATCTATG CGGCGGACGA TACGTGCTGC TTCGAGACCG ACAGCAAGTT GGCCGAATTC
GCCCCTCTCG TAGATACGGA CACGGTGCGC ATCGAAACAA CACTCAATCG TATCGACCTG
GCGCCAGGCG ACTATCGCGT TACGGTGGGC CTTTTTTCGG CAGACTGGCA GCAGGTTTAC
GATTATCATG CTGAAGTCTA TCCTCTCGCC GTGACCGGCC CCGGCCCAAG AAAGGGTATG
CTGAATCCCC CGACACAGTG GCAGCAGGTG CAGTCGCGCC CCACCGCGAC CTCGCCGGAC
CACGGCTCAT TGGGGCAGCA CAGCTTGGAT CCGAACTCCT GA
 
Protein sequence
MRQGAITVHD VGKRYRAQGG ARSTTLKGYL LSGRSVVPSK SFWGLRHISF AVAPGQAVGV 
VGLNGAGKST LLRLIGGVGR PDEGQIKVMG RIGALLDIGA GLTDDLTGRE NIFLLGVIAG
MRRTEVAERF DEIVAFAELE AAVENPVRSY STGMRMRLAF AVAVHVRPDI LLIDEALAVG
DQAFQQKCIA RVKEILNDGA TIFFVSHDVS QVREICDYVL FLRGGRVVGY GPIDEMLPLY
TSAVEAKVAS VQHEPFGVTK LPVELVPQVS RFGNGELQIT AVALLNEQGM PTSTIVAGDR
LSISLTYVGA TRDRNAVIVI GIYAADDTCC FETDSKLAEF APLVDTDTVR IETTLNRIDL
APGDYRVTVG LFSADWQQVY DYHAEVYPLA VTGPGPRKGM LNPPTQWQQV QSRPTATSPD
HGSLGQHSLD PNS