Gene Rleg_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3174 
Symbol 
ID8015770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3177315 
End bp3178853 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content58% 
IMG OID644825740 
ProductABC transporter related 
Protein accessionYP_002976968 
Protein GI241205872 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATA CTATCCTCGA AATGCGGAGC ATCACCAAGA CGTTCCCGGG CGTCAAGGCG 
CTGGAGAATG TGAACCTCAA GGTTCGCCAG GGTGAAATCC ACGCATTGGT GGGCGAAAAC
GGGGCCGGCA AATCGACCCT GATGAAGGTG CTATCCGGCG TCTATCCGAC AGGAAGCTAT
GAAGGCGACA TCATCTACGA AGGTGAGACG CGCAACTTCA AGGTCCTGAA GGACTCCGAA
GAAATCGGCA TCGTCATCAT TCACCAGGAA CTGGCGCTCG TGCCGTTGCT GTCGATCGGC
GAAAACATCT TCCTTGGCAA CGAGAATGCC AAGAGCGGCG TCATCAGCTG GGACGAGACA
TTCAACCGCA CCAAGCAGCT GCTGAAGAAA GTAGGCCTGT CCGAATCTCC GAACACGCTG
GTCACCGACA TCGGCGTCGG CAAGCAGCAG CTCGTCGAGA TCGCCAAGGC GCTGTCGAAG
AGCGTCAAGC TGCTCATCCT GGACGAGCCG ACCGCCTCGC TGAATGAACG CGATTCCGAC
GCGCTGCTCA CTCTGCTCAT GGAGTTCCGC AAGCAGGGCA TCACCTCCAT CATCATTTCC
CACAAGCTGA ACGAGATCCG CAAGGTCGCC GACCAGATCA CGGTCCTGCG CGACGGCATG
ACGGTCAAGA CGCTCGACTG TCACGCGGAC GAGATCAGCG AAGACATCAT CATCCGCAAC
ATGGTCGGCC GCGATCTTGA AGACCGCTAT CCGCCGCGTT CGGTGCCGAT CGGCGAAACC
ATTCTCGAAG TGAAGAACTG GAACGCCTAC CACCAGCAGC ACCGCGACCG TCAGGTCCTG
CACAATATCA ACGTCACCGT ACGCAAGGGC GAAGTCGTCG GCATCGCCGG CCTGATGGGG
GCAGGGCGCA CAGAATTCGC CATGAGCCTG TTCGGCAAGG CCTATGGCCA CAAGGTTTCG
GGCGAGGCGC TGATGCACGG CAAGCCGGTC GATGTCAGCA CCGTGCGCAA GGCAATCGAT
GCCGGGCTCG CCTACGTCAC CGAAGACCGC AAGCAGCTCG GCCTCGTGCT CAACGACACG
ATCCTGCACA ACACGACGCT CGTCAATTTG GCGGCGGTGT CGAATGCGTC CGTTATCGAC
AGCTTCAAGG AAGCGCGGGT TGCGACCGAC TATCGGTCGA AGTTGCGTAT CCGTTCCTCC
AGCATTTTCC AGGAGACGGT CAATCTTTCC GGCGGCAACC AGCAGAAGGT GGTGCTGTCG
AAATGGCTGT TCTCCAATCC CGATATTTTG ATCCTCGACG AGCCGACGCG CGGCATCGAT
GTTGGCGCAA AATACGAAAT CTATACTATC ATCAACCAGC TTGCCGCCGA TGGAAAGGGC
GTTCTGATGA TCTCGTCGGA AATGCCCGAA CTGCTCGGCA CGTGTGACCG CATCTACGTG
ATGAACGAAG GACGCATCGT CGCGGAACTG CCGAAGGGAG AAGCAAGCCA GGAAACCATC
ATGCGCGCTA TCATGCGCTC AGGGGAGAAG AAACAATGA
 
Protein sequence
MDNTILEMRS ITKTFPGVKA LENVNLKVRQ GEIHALVGEN GAGKSTLMKV LSGVYPTGSY 
EGDIIYEGET RNFKVLKDSE EIGIVIIHQE LALVPLLSIG ENIFLGNENA KSGVISWDET
FNRTKQLLKK VGLSESPNTL VTDIGVGKQQ LVEIAKALSK SVKLLILDEP TASLNERDSD
ALLTLLMEFR KQGITSIIIS HKLNEIRKVA DQITVLRDGM TVKTLDCHAD EISEDIIIRN
MVGRDLEDRY PPRSVPIGET ILEVKNWNAY HQQHRDRQVL HNINVTVRKG EVVGIAGLMG
AGRTEFAMSL FGKAYGHKVS GEALMHGKPV DVSTVRKAID AGLAYVTEDR KQLGLVLNDT
ILHNTTLVNL AAVSNASVID SFKEARVATD YRSKLRIRSS SIFQETVNLS GGNQQKVVLS
KWLFSNPDIL ILDEPTRGID VGAKYEIYTI INQLAADGKG VLMISSEMPE LLGTCDRIYV
MNEGRIVAEL PKGEASQETI MRAIMRSGEK KQ