Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3170 |
Symbol | |
ID | 8014069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3171689 |
End bp | 3173428 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644825736 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_002976964 |
Protein GI | 241205868 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGA TAGCGGAATG GCCGCGCAGG CTGAGGTCGC AGGAATGGTA CGGCGGTACG AGCCGCGACG TGATTTATCA CCGCGGCTGG CTTAAGAACC AGGGTTATCC GCACGACCTG TTCGACGGCC GGCCGGTGAT CGGCATCCTC AACACCTGGT CGGATATGAC CCCCTGCAAC GGTCATCTCA GAGAGCTCGC CGAGAAGGTG AAGGCGGGCG TATGGGAGGC CGGCGGCTTC CCGCTCGAGG TGCCGGTGTT CTCGGCATCC GAAAACACCT TCCGCCCGAC CGCGATGATG TACCGCAATC TTGCCGCGTT GGCGGTAGAA GAGGCGATCC GCGGCCAGCC GATGGATGGC TGCGTATTGC TGGTGGGCTG CGACAAGACC ACGCCGTCGC TTATCATGGG GGCGGCTTCC TGCGACCTGC CTTCTATCGT CGTCACAGGC GGACCGATGC TAAACGGCTA TTTCCGTGGC GAACGGGTCG GCTCGGGCAC GCATCTGTGG AAGTTTTCCG AAATGGTGAA GGCCGGCGAG ATGACGCAGG CCGAATTCCT CGAGGCTGAG GCCTCGATGA GCCGTTCGTC GGGCACCTGC AACACCATGG GCACCGCCTC CACCATGGCT TCCATGGCCG AGGCACTCGG CATGGCTCTG TCAGGCAACG CCGCGATCCC GGGCGTCGAT TCCCGCCGCA AGGTCATGGC GCAGCTGACC GGCCGGCGTA TCGTGCAGAT GGTCAAGGAT GACCTGAAGC CCTCCGAGAT CATGACGAAG CAAGCCTTCG AGAATGCCAT CCGCACCAAC GCGGCCATCG GCGGATCGAC CAACGCCGTC ATCCACCTGC TCGCCATTGC CGGCCGTGTC GGCATCGATC TTTCGCTTGA CGACTGGGAT CGCTGCGGCC GTGACGTCCC GACCATCGTC AACCTGATGC CGTCGGGCAA GTATCTGATG GAGGAGTTCT TCTATGCCGG CGGCCTGCCG GTGGTGCTGA AGCGCCTCGG CGAGGCGGGC CTGCTGCACA AGGATGCGCT GACGGTATCC GGCGAAACCG TCTGGGACGA GGTCAAGGAC GTCGTCAACT GGAACGAAGA CGTTATCCTT CCGGCCGAAA AGGCGCTGAC AGCTTCGGGC GGCATCGTCG TGCTGCGCGG CAATCTCGCG CCGAAGGGCG CGGTGTTGAA GCCTTCGGCG GCTTCGCCAC ATCTGCTGGT GCACCGGGGC AGGGCGGTCG TGTTTGAGGA CATCGACGAC TACAAGGCCA AGATAAACGA CGAGAACCTC GACATCGACG AAACCTGCAT CATGGTCATG AAGAACTGTG GGCCGAAGGG CTATCCCGGG ATGGCCGAGG TCGGCAACAT GGGTCTGCCG CCGAAGGTGC TCAAGAAGGG CATCCTCGAC ATGGTGCGTA TTTCCGACGC CCGCATGTCC GGAACTGCCT ACGGTACCGT CGTGCTGCAC ACCTCGCCGG AAGCGGCGGT CGGCGGTCCG CTCGCAGTCG TGAAAAACGG CGACATGATC GAGCTGGATG TGCCGAACCG TCGTCTGCAT CTCGACATTT CCGATGAGGA ACTGGCGCGG CGGCTCGCTG AGTGGCAGCC GAACCATGAT CTGCCCACAT CCGGCTATGC CTTCCTGCAT CAGCAGCATG TCGAAGGGGC CGATACCGGC GCCGATCTCG ACTTCCTGAA GGGATGTCGT GGAAACGCGG TCGGCAAGGA CAGCCATTAA
|
Protein sequence | MKKIAEWPRR LRSQEWYGGT SRDVIYHRGW LKNQGYPHDL FDGRPVIGIL NTWSDMTPCN GHLRELAEKV KAGVWEAGGF PLEVPVFSAS ENTFRPTAMM YRNLAALAVE EAIRGQPMDG CVLLVGCDKT TPSLIMGAAS CDLPSIVVTG GPMLNGYFRG ERVGSGTHLW KFSEMVKAGE MTQAEFLEAE ASMSRSSGTC NTMGTASTMA SMAEALGMAL SGNAAIPGVD SRRKVMAQLT GRRIVQMVKD DLKPSEIMTK QAFENAIRTN AAIGGSTNAV IHLLAIAGRV GIDLSLDDWD RCGRDVPTIV NLMPSGKYLM EEFFYAGGLP VVLKRLGEAG LLHKDALTVS GETVWDEVKD VVNWNEDVIL PAEKALTASG GIVVLRGNLA PKGAVLKPSA ASPHLLVHRG RAVVFEDIDD YKAKINDENL DIDETCIMVM KNCGPKGYPG MAEVGNMGLP PKVLKKGILD MVRISDARMS GTAYGTVVLH TSPEAAVGGP LAVVKNGDMI ELDVPNRRLH LDISDEELAR RLAEWQPNHD LPTSGYAFLH QQHVEGADTG ADLDFLKGCR GNAVGKDSH
|
| |