Gene Rleg_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3166 
Symbol 
ID8014065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3166987 
End bp3168396 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content60% 
IMG OID644825732 
Productprotein of unknown function DUF404 
Protein accessionYP_002976960 
Protein GI241205864 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.839276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.725586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCATTTG ATGAAATGAT TACCGGGGAC GAAAGCCCTC GCCCGCCTTA CGACAAATAC 
TTCGAGTGGT ACAACAGCCA AGACCGGGCG CATCTGATTG CCAAGTCCCG CGATGCGGAA
AACATCTTCC GGAAGACCGG CATCACCTTC GCGGTCTACG GCCATGCCGA CAGTTCCGAA
AAGCTCATCC CCTTCGACAT CATTCCCCGC ATCATCTCCG CCCGCGAATG GCGCAAGCTC
GCCCAAGGCA TCGAGCAGCG GGTGATCGCG CTCAACGCCT TTCTCGACGA TATCTACCAT
AAGCAGGAGA TCATCCGCGC CGGCCGCGTT CCGCGTGAGC TGATCGAGAA TAACGTCACC
TTCATCCCCG AAATGATCGG TTTCCGGCCG CCCGGCGGCG TCTATACCCA CATCGTCGGC
ACCGACATCG TGCGCACCGG AGAGGACCAG TTTTACGTGC TGGAGGATAA TGCCCGCACG
CCCTCCGGTG TCAGCTACAT GCTGGAAAAC CGGGAAACCA TGATGCAGAT GTTCCCTGAG
CTCTTTCATG AGAACAAGGT GCAACGTGTC GAGGATTATC CCTACCTGCT GCGTCAGAGC
CTCGCCTCGC TTGCCCCTCC CGGCTGCAAG GGCAAGCCGC GCGTCGCCGT GCTGACGCCG
GGCATTTACA ATTCCGCGTA TTACGAGCAT TCGTTCCTCG CCGACATGAT GGGCGTCGAA
CTGGTCGAAG GCGCGGATCT GCGCGTCATC GACGGCAAGG TGAAAATGAG GACGACACGC
GGTTACGAGG CGATCGACGT GCTCTACCGC CGCGTCGACG ATGACTTCCT CGATCCCCTG
ACCTTCCGGT CCGATTCCGC GCTCGGCATT CCCGGCATCA TGGATGTCTA CCGCTCCGGC
AACATCACCA TCGCCAATGC GCCGGGCACC GGCATTTGCG ACGACAAGGC GATCTACTCC
TATATGCCCG AGATCGTCGA ATTCTATACC GGCCGCAAGG CGCTGCTCGA AAACGTGCCG
ACCTGGCGCT GTTCGGAAGC CGACAGCCTG AAATATGTGC TGGAACACCT GGAAGAGCTG
GTGGTCAAGG AGGTGCACGG CTCCGGCGGC TACGGCATGC TGGTCGGCCC GACGGCATCG
AAGAAGGAGC GCGCCGATTT CGCCGAAAAG CTGAAGGCCA AACCGAACAA TTACATCGCC
CAGCCAACGC TGTCGCTCTC CACGGTGCCG ATCCTCGTCA ACAAGGGCAT TGCGCCGCGC
CATGTCGACC TTCGCCCCTA TGTGCTTGTA TCCGACAAGG TGCAGATCAT TCCGGGCGGG
CTCACCCGCG TAGCGCTGAA GCAGGGCTCG CTGGTGGTCA ATTCCAGCCA GGGCGGCGGC
ACCAAAGACA CTTGGGTATT GGAGGACTGA
 
Protein sequence
MAFDEMITGD ESPRPPYDKY FEWYNSQDRA HLIAKSRDAE NIFRKTGITF AVYGHADSSE 
KLIPFDIIPR IISAREWRKL AQGIEQRVIA LNAFLDDIYH KQEIIRAGRV PRELIENNVT
FIPEMIGFRP PGGVYTHIVG TDIVRTGEDQ FYVLEDNART PSGVSYMLEN RETMMQMFPE
LFHENKVQRV EDYPYLLRQS LASLAPPGCK GKPRVAVLTP GIYNSAYYEH SFLADMMGVE
LVEGADLRVI DGKVKMRTTR GYEAIDVLYR RVDDDFLDPL TFRSDSALGI PGIMDVYRSG
NITIANAPGT GICDDKAIYS YMPEIVEFYT GRKALLENVP TWRCSEADSL KYVLEHLEEL
VVKEVHGSGG YGMLVGPTAS KKERADFAEK LKAKPNNYIA QPTLSLSTVP ILVNKGIAPR
HVDLRPYVLV SDKVQIIPGG LTRVALKQGS LVVNSSQGGG TKDTWVLED