Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3165 |
Symbol | |
ID | 8014064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3165720 |
End bp | 3166619 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644825731 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_002976959 |
Protein GI | 241205863 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.421742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTCG ATCGCCTTGC CCCCGCCGTT TTCGTCCTGC TCTGGTCTAC GGGCTGGGTG GTGGCGAAAT ATGCCTCGCT GCATTCCGAG CCCTTCACCT TTCTTTCGAT ACGTTATGCG CTGTCGGCGG CGGCATTCCT GGCACTCTGC CTTGTGGTGC GGGCGCAATG GCCCAGCCGG GCGAGGGCGC TGCGCGCCGT CTATTCCGGC TTCTTCCTTC ATGGTTTCTA TCTCGCCGGT CTCTGGTGGG CGATCGCCAA TGGCGTGCCG GCCGGCATAT CGGGCATCAT CGCGGCGCTG CAGCCGCTGC TGACGGCAAT GGCAGCTCCC TTCCTCATCG GCGAGCGGCT GCAGCAGGCA CAGAAACTCG GCCTTGCCCT CGGCTTCATC GGCATTGCCA TCGCCATTTC GCCGAAGCTG CTCGATCCGG CGACCGCCGA TCTCACGCAT GCCGCCCTGC CTCTGGCGAT CAACCTCGTC GCCATGGCGT CCGTCACCTA CGGCACGCTC TATCAGAAGA AACACCTGCA ATCCGGCGAC CTCAGAACCA TCGCGACCTT GCAATATATC GGCGCGCTGA TCCTCACCCT GCCGCTGTCG CTGATCTTCG AGCATCAGCA TTTCGACGGC GCCGCGCAGG CCTATGGTGC GCTTGCTTGG TCGGTCTTCG GCCTGTCGAT GGGCGGCGTC GGGCTGCTGC TCTATCTGAT CCGCCGGGGT CAGGTGTCAC GCGCCGCCTC GCTGATCTAT CTGATGCCGC CAGCGGTTGC TCTCGAAGCC TTCATCGCCT TCGGGGAACC GCTGACCCTG CCGCTGATCG TCGGCACCGT GGTGGTCGTG ACAGGCGTCT ATCTCACGAA CCGCAGGGCG TCCAGCGAGC ATAGGCCTGC GGAGGTTTAG
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Protein sequence | MSLDRLAPAV FVLLWSTGWV VAKYASLHSE PFTFLSIRYA LSAAAFLALC LVVRAQWPSR ARALRAVYSG FFLHGFYLAG LWWAIANGVP AGISGIIAAL QPLLTAMAAP FLIGERLQQA QKLGLALGFI GIAIAISPKL LDPATADLTH AALPLAINLV AMASVTYGTL YQKKHLQSGD LRTIATLQYI GALILTLPLS LIFEHQHFDG AAQAYGALAW SVFGLSMGGV GLLLYLIRRG QVSRAASLIY LMPPAVALEA FIAFGEPLTL PLIVGTVVVV TGVYLTNRRA SSEHRPAEV
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