Gene Rleg_3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3165 
Symbol 
ID8014064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3165720 
End bp3166619 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content64% 
IMG OID644825731 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002976959 
Protein GI241205863 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.421742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCG ATCGCCTTGC CCCCGCCGTT TTCGTCCTGC TCTGGTCTAC GGGCTGGGTG 
GTGGCGAAAT ATGCCTCGCT GCATTCCGAG CCCTTCACCT TTCTTTCGAT ACGTTATGCG
CTGTCGGCGG CGGCATTCCT GGCACTCTGC CTTGTGGTGC GGGCGCAATG GCCCAGCCGG
GCGAGGGCGC TGCGCGCCGT CTATTCCGGC TTCTTCCTTC ATGGTTTCTA TCTCGCCGGT
CTCTGGTGGG CGATCGCCAA TGGCGTGCCG GCCGGCATAT CGGGCATCAT CGCGGCGCTG
CAGCCGCTGC TGACGGCAAT GGCAGCTCCC TTCCTCATCG GCGAGCGGCT GCAGCAGGCA
CAGAAACTCG GCCTTGCCCT CGGCTTCATC GGCATTGCCA TCGCCATTTC GCCGAAGCTG
CTCGATCCGG CGACCGCCGA TCTCACGCAT GCCGCCCTGC CTCTGGCGAT CAACCTCGTC
GCCATGGCGT CCGTCACCTA CGGCACGCTC TATCAGAAGA AACACCTGCA ATCCGGCGAC
CTCAGAACCA TCGCGACCTT GCAATATATC GGCGCGCTGA TCCTCACCCT GCCGCTGTCG
CTGATCTTCG AGCATCAGCA TTTCGACGGC GCCGCGCAGG CCTATGGTGC GCTTGCTTGG
TCGGTCTTCG GCCTGTCGAT GGGCGGCGTC GGGCTGCTGC TCTATCTGAT CCGCCGGGGT
CAGGTGTCAC GCGCCGCCTC GCTGATCTAT CTGATGCCGC CAGCGGTTGC TCTCGAAGCC
TTCATCGCCT TCGGGGAACC GCTGACCCTG CCGCTGATCG TCGGCACCGT GGTGGTCGTG
ACAGGCGTCT ATCTCACGAA CCGCAGGGCG TCCAGCGAGC ATAGGCCTGC GGAGGTTTAG
 
Protein sequence
MSLDRLAPAV FVLLWSTGWV VAKYASLHSE PFTFLSIRYA LSAAAFLALC LVVRAQWPSR 
ARALRAVYSG FFLHGFYLAG LWWAIANGVP AGISGIIAAL QPLLTAMAAP FLIGERLQQA
QKLGLALGFI GIAIAISPKL LDPATADLTH AALPLAINLV AMASVTYGTL YQKKHLQSGD
LRTIATLQYI GALILTLPLS LIFEHQHFDG AAQAYGALAW SVFGLSMGGV GLLLYLIRRG
QVSRAASLIY LMPPAVALEA FIAFGEPLTL PLIVGTVVVV TGVYLTNRRA SSEHRPAEV