Gene Rleg_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3162 
Symbol 
ID8015768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3161352 
End bp3162380 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content61% 
IMG OID644825728 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002976956 
Protein GI241205860 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.19211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAA AGACGGATGA AGTTCCGGGA CAGACCCGCG TCACTATTCA CGGCGTCGCT 
GCCGCAGCCG GTGTCTCCAA ATCTACCGTG TCCCGCATAC TGGACGAGAG GCTTCCCCGC
TCCGACAGCG AGACAGCGCG TCGCGTGCGC AAGGTTGCCG AAGAGCTCGG ATACGTTCGG
GATGTTTCCG CAGCGAGCCT CAGGCGCGGC AACACGATGA CAATCGGGGT GATCGTGCCC
AGGCTGACGG ATACGGTCAT GGCCATGCTT TATGAAGCAC TGGCCAAGGC CTGCAGCCGT
AGCGGCCGCT TCGCGATTGT CGCAACGACC GACGACAAGC CAAAGGCAGA CCGGCTTGCG
GCCGAGTCTC TGCTGAAACG CGGCGTCGAT GGTCTGATTC TTTCGACAGC GCGGGAAGAC
GATGACTTTC CGGACGAGCT GGCAAAACGC GGTATTCCTT ATGTCCTGGC ACTCCGGACG
GATGGCCACA GCCTCTCGTC GGTCGGCGAT GACAGGCTCG GTGGGTACCT CGCCGCCCGC
CACCTCCTCG ATCTCGGCCA TCGCAGAATT GGCGTCATCG CCGGTCCATC CTATGCCTCC
AGTTCGCGGG GACGCGTGGA GGGTTTCCGC CACGCCTTGG AAGAGGCCGG ACTGAATGCA
GATCCCTCAT ACATCATTCC CTCGACATTC GGCATCGAGT CCGGTGCGGT GGCCGTCGAA
ACCCTGATGC ATCTTAATCC CCGCCCAACC GCTATTTTCG CCGTCAACGA CAATACCGCT
ATCGGCGCGT TGTCGGGACT GACGAAACTT GGTCTTTCCG TGCCGCAGGA CATCTCGATC
GTAGGCTATA ACGACATTCC GATTGTCGGC CACCTCCCTA CGCCGCTCAC GACGTTGCGG
GTGCCGTTTG AGCAAATTGC AGCAAACGCT CTCGATCTTC TTGCCGGCGA CAACAGTCCC
GCCGACGAGC GTATTCGGAT CTCGGCCCCC ACACTTATTC CAAGGAAATC GACGGCACCG
CTACGCTAA
 
Protein sequence
MSSKTDEVPG QTRVTIHGVA AAAGVSKSTV SRILDERLPR SDSETARRVR KVAEELGYVR 
DVSAASLRRG NTMTIGVIVP RLTDTVMAML YEALAKACSR SGRFAIVATT DDKPKADRLA
AESLLKRGVD GLILSTARED DDFPDELAKR GIPYVLALRT DGHSLSSVGD DRLGGYLAAR
HLLDLGHRRI GVIAGPSYAS SSRGRVEGFR HALEEAGLNA DPSYIIPSTF GIESGAVAVE
TLMHLNPRPT AIFAVNDNTA IGALSGLTKL GLSVPQDISI VGYNDIPIVG HLPTPLTTLR
VPFEQIAANA LDLLAGDNSP ADERIRISAP TLIPRKSTAP LR