Gene Rleg_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3106 
Symbol 
ID8015761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3105971 
End bp3106963 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content64% 
IMG OID644825673 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002976901 
Protein GI241205805 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.236383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATA CCCTCCTCGA ACTCAAAGAC TACTCGATCA CCTTCAAGAC GCCGGATGGA 
GAAGTGAAGG CGGTCTCGAA CATGAACCTG ACGGTCAAGC GCGGCGAGCG CATCGCCATC
GTCGGCGAAT CCGGCTCCGG CAAGAGTCAG ACCTTCCTCG GCATCATGGG CCTGCTCGCC
AAGAACGGCA AAACGACGGG ACAGGCGCTG CTCGAAGGCA AGGACGTGCT GGCGCTGAAA
CCGCGCGAGC TCGACCAGAT CCGCGGCAAA GACATGGCGA TGGTCTTCCA GGACCCGATG
ACGGCGCTCA ATCCAACGCT GAAGATCTCC CGGCAGCTGA CGGAGCAGCT CGAGGTTCAC
GGCGGGCTGA CGGCGCGCGC CGCATCCGCC GCCGCACTCG ATATGCTGAA ACGCGTTGGC
ATCCCCGACC CGACGCGACG CTTCCACCTC TACCCGCATG AGCTCTCCGG CGGCATGCGA
CAGCGCATCG TCATCGCCAT GGCGCTGCTC ACCCGGCCGA AGCTGTTGAT CGCCGACGAA
CCGACAACGG CCCTCGACGT CACCATCCAG GCACAGATCC TCGACCTCTT CAACGATCTG
ACGGCGGAGA TGAACACGGC GCTGATCATG ATCACCCACG ATCTCGGCGT CGTTGCCGGC
CTCGCCGACC GCGTCGCCGT CATGTATGCC GGTCGCATCG TCGAGGAAGC GCCGGTCGAT
GAACTCTTCG ACAATCCGGC CCATCCCTAT ACCGCAGCAC TGCATGCCTC GATCCCACGC
CCTGACCAGG ATGTCGACGA CCTCGTCGTC ATCCCCGGCC GTCCGCCGAA CCTGCAGCAC
CTGCCGAAGG GCTGCAATTT CTCGCCGCGC TGTTCGCAGG TCCAGGACGA TTGCATCGAC
CGACCGCCGC CGCTCGAAAC GCTGGCGCCG CACCATTGCG CCGCCTGTTA CCACCCCTTC
CCGCGTCGCG AGGAGCTGCT GAACCATGGC TGA
 
Protein sequence
MTDTLLELKD YSITFKTPDG EVKAVSNMNL TVKRGERIAI VGESGSGKSQ TFLGIMGLLA 
KNGKTTGQAL LEGKDVLALK PRELDQIRGK DMAMVFQDPM TALNPTLKIS RQLTEQLEVH
GGLTARAASA AALDMLKRVG IPDPTRRFHL YPHELSGGMR QRIVIAMALL TRPKLLIADE
PTTALDVTIQ AQILDLFNDL TAEMNTALIM ITHDLGVVAG LADRVAVMYA GRIVEEAPVD
ELFDNPAHPY TAALHASIPR PDQDVDDLVV IPGRPPNLQH LPKGCNFSPR CSQVQDDCID
RPPPLETLAP HHCAACYHPF PRREELLNHG