Gene Rleg_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3104 
Symbol 
ID8014012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3104133 
End bp3105056 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content59% 
IMG OID644825671 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002976899 
Protein GI241205803 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.335255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.353351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT ACGCACTCCG TCGCCTGCTG TCGACGATCC CCGTCATGTG GATCGCCGTG 
ACAGCCTCGT TTTTTGTTTT GCGCCTTGCC CCCGGCGGCC CTTTCGATGG CGAAAGGCCA
TTGCCGCCGG TGATCCTGAA GAACCTTGCG ATCCACTACA ATCTCGATAA GCCGCTCATC
CAGCAGTACC TGATCTATGT CGGTGACCTG CTCCGGGGCG ATCTCGGTCC CTCCTTCGCG
AGTGAGGATT TCACAGTCGC CCAGCAGATC ATGATCGGTC TGCCCTACAC CTTCACCATC
GGTACGGCTG CCTTCCTGAT TGCCATCATT GTCGGCGTGG CCGTCGGCTG TCTCGGGGCG
CTCTATCAGA ACAAGGCACC GGATTATATT CTGGGCGCGC TCATTCTGGT GGGCGTCGTG
CTACCGAACT TCCTGATTGC GCCCATCCTG CAGCTCGTCT TCGGCATCCA TCTCGCGTGG
TTTCCGGTCG GCGGCTGGGG TGACGGCTCG ATCAAATACC TCATCCTGCC GATCGTCGTT
TTGGCGCTGC CGCATGCCGG CCGTATCTCG CGCATCACGC GCGGCTCGAT GATCGAGGTG
ATGAATCAGA ATTTCATTCG CACCGCCAAG GCCAAAGGCA TCGGCCCCCG CCTGACGGTC
ATGCGCCACG CGCTGAAGCC AGCGCTGATG CCTGTCGTCT CCTATCTGGG TCCAGCAGCA
AGTTACCTTC TCACCGGCTC GCTGGTTGTC GAGAGCATCT TCGGATTGCC CGGCATCGGC
CGCTATTTCG TCAACGCAGC GCTGAACCGC GATTACGGCA TGGTTCTCGG CACGGTCATC
TTCTACATGG TGCTGATCGT GTTCCTGAAC CTTCTCGTCG ATATCGCCTA TGCCTGGCTC
GATCCGAAAG TGAGAAACCG ATGA
 
Protein sequence
MIKYALRRLL STIPVMWIAV TASFFVLRLA PGGPFDGERP LPPVILKNLA IHYNLDKPLI 
QQYLIYVGDL LRGDLGPSFA SEDFTVAQQI MIGLPYTFTI GTAAFLIAII VGVAVGCLGA
LYQNKAPDYI LGALILVGVV LPNFLIAPIL QLVFGIHLAW FPVGGWGDGS IKYLILPIVV
LALPHAGRIS RITRGSMIEV MNQNFIRTAK AKGIGPRLTV MRHALKPALM PVVSYLGPAA
SYLLTGSLVV ESIFGLPGIG RYFVNAALNR DYGMVLGTVI FYMVLIVFLN LLVDIAYAWL
DPKVRNR