Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3080 |
Symbol | |
ID | 8013990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3079065 |
End bp | 3080015 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644825648 |
Product | Extensin family protein |
Protein accession | YP_002976876 |
Protein GI | 241205780 |
COG category | [S] Function unknown |
COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAAAAC TTTCGACATT GGCGATCCTT TTCGCCGCTA CCGCCTTTCT TGCCGGCGCT CGCCTGCCCC CGCAAGGCCC GATGCCCGAA CCTCGGCCAG ATGCCGGACA GCCGACCAGC CCCACCTCCC CTTCCTCGGA AAAGACGGAA CCGCCCGCGC CCGGAGAGGT CCCGGCCCCT CAGCCGAAAC CCGACGTCAA GGACCCGGAG GCACCGGCAT CGAGCCCGCC AGCGCCGCAG GCCGCACCGT CAGAGCCCGG GCCGACAGAA CCGATGCAAG GTCCGCCGCG GCCGCCGGGC AGCCCCGAAA GCTCACAGCC GCCGACGGAA GAAGGTAAGC CGCCCGGCGA GCAGACACTT GAAGAGCAAC ACCTGACGAT CGAACCGGAA AGCGATGCCG AGCATGCCGA ATGCACGGCC GCCCTTCAGT CCCTGGGCGT CGTCTTCAAG GACACGCCGC GCATCGATGA CGGTAACGGC TGCGGCATCG ACAAGCCGAT CATCGTCTCT GAAGCCCTGC CCGGCATCAA GCTGAAGCCG GAGGCGACGA TTCGCTGTCC GGCAGCGCTT GCCCTTGCTC GCTGGATGAA GGACAGCGTC ATCCCGGCGG CTTCCGCCGC CCTACCGGAG CAGGGCCGCA TCACCACCGT CAACCAGGCA ACGTCCTATA TGTGCCGCCT GCGTAACAGT GCCGGAACCG GCAAGATCTC CGAGCATGCC CGCGGCAACG CCATCGATAT TGCGAGCTTC CATTTCGAAA AGGGTGAAGA TGTCGCCGTC CGCTCCCGTC GCGAGGATTC TACGCTGACC GGCGCCTTCC AGCGCACCGT CAGCGCCGCC GGCTGCCTCT ACTTCACCAC CGTCCTCGAT CCGGAAAGCG ACGCCGCCCA CGAAACCCAT TTCCATCTAG ACGTCATCGA GAGGAAGGGT GGCTATCGTT ATTGCCATTA G
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Protein sequence | MRKLSTLAIL FAATAFLAGA RLPPQGPMPE PRPDAGQPTS PTSPSSEKTE PPAPGEVPAP QPKPDVKDPE APASSPPAPQ AAPSEPGPTE PMQGPPRPPG SPESSQPPTE EGKPPGEQTL EEQHLTIEPE SDAEHAECTA ALQSLGVVFK DTPRIDDGNG CGIDKPIIVS EALPGIKLKP EATIRCPAAL ALARWMKDSV IPAASAALPE QGRITTVNQA TSYMCRLRNS AGTGKISEHA RGNAIDIASF HFEKGEDVAV RSRREDSTLT GAFQRTVSAA GCLYFTTVLD PESDAAHETH FHLDVIERKG GYRYCH
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