Gene Rleg_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3071 
Symbol 
ID8013981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3068239 
End bp3069438 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content65% 
IMG OID644825639 
Productbenzoate transporter 
Protein accessionYP_002976867 
Protein GI241205771 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.194817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAG ATTTTTCCGT CCAAGCCCTG TTCATGGGGC TGCTGACCGC CTTCGTCGGT 
TCCGCCAGTT CCTTCGCCGT TGTACTGCAC GGGCTGCAGG CGGTCGGCGC CACGGATGTA
CAGGCGGCTT CCGGGCTGAT GGCATTGTCG ATTTCCATGG GCGTCTGCGC GATCGTGCTG
AGTGCCGTGA CCAGATTGCC GGTCAGCATC GCCTGGTCGA CACCGGGTGC CGCACTGCTG
GCAAGCACCG GGGCGATCGA GGGCGGCTTC AATGCGGCGG TCGGGGCATT CCTGATCTGT
GCTGCGCTGA TTATCCTTGC GGGACTGTTC AAGCCGCTCG GGCGAGCGGT TGCCGCCATT
CCGGCACCAC TCGGCAATGC AATGCTCGCC GGCGTGCTGA TCGGCCTCTG CTTCGCGCCG
GTAAAGGCGA TCGGCTTCAA TCCGCTGTTC GGCCTGCCGA TCGTCGTCGC TTGGATCGTC
GTCGGCGCCT TCAAGCGGCT TTGGGCGGTG CCGGCAGCAC TCGCGGCCTT CGTGCTGGTG
CTCGCCTTCG GCGTCGATAT CCCTGACGGT GCGCTCGGCT CGCTGGAACA ATCACTGGTG
CCAACGGCGG AAATCGTCCG ACCGGTGTTC AATCTTGCCG GCCTCATCTC GATCGCGCTG
CCGCTCTTCA TCGTCACCAT GGCCTCGCAG AACATTCCGG GTATCGCGGT GCTGAAGGTC
AACCATTACG ATCCGAAGCC CGGCCCGCTC TTTGCCGTCA CCGGCTTCTT CTCGCTGCTG
TCGGCGCCGT TCGGCGGCCA CGCCGTTAAT CTGGCGGCCA TCACCGCGGC GATGTGCGCC
GGACAGGACG CCCATGCCGA TCCGAAGCGG CGCTATTGGG CGTCACTCAT CGCCGGTGTC
GGCTATATCA TTCTCGGGCT GCTCGCCGGC GCGGTGACGG CCTTCGTCGC CCTTGCGCCT
TCCATCCTGA TCGAGGCGGT GGCCGGCCTG GCGCTGGTCG GCGCCTTCTC GTCCTCGGCA
ATGTCGGCCT TCCAGGCGCC GGACTCACGT GAGGCGGCGG CAATCACCTT CCTCGTCACC
GCCTCCGGCG TTTCCTTCGG CGGTATTTCC GGCGCCTTCT GGGGCCTGCT CGCGGGTGGG
CTGATGCTGG CGCTGTCGCG GCTGGTGAGG CTTTGGAAAG ACCGAGCTCA GTCGAGGTAA
 
Protein sequence
MLKDFSVQAL FMGLLTAFVG SASSFAVVLH GLQAVGATDV QAASGLMALS ISMGVCAIVL 
SAVTRLPVSI AWSTPGAALL ASTGAIEGGF NAAVGAFLIC AALIILAGLF KPLGRAVAAI
PAPLGNAMLA GVLIGLCFAP VKAIGFNPLF GLPIVVAWIV VGAFKRLWAV PAALAAFVLV
LAFGVDIPDG ALGSLEQSLV PTAEIVRPVF NLAGLISIAL PLFIVTMASQ NIPGIAVLKV
NHYDPKPGPL FAVTGFFSLL SAPFGGHAVN LAAITAAMCA GQDAHADPKR RYWASLIAGV
GYIILGLLAG AVTAFVALAP SILIEAVAGL ALVGAFSSSA MSAFQAPDSR EAAAITFLVT
ASGVSFGGIS GAFWGLLAGG LMLALSRLVR LWKDRAQSR