Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3030 |
Symbol | |
ID | 8013945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 3026496 |
End bp | 3028847 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644825598 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_002976826 |
Protein GI | 241205730 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATT CCGTTGAGAA CAGATTTTTT GCGATAGTTT GCGGAGCGCT GCTCGTCTTT GTCGCTCCCC TCTTTGTTCT CTTCCTATTT CTTTCCTCGG AACGGGCCGA CAAGGAAATA CGCGACCATA TCTCCGTTCT TCTTGTCGCC AATGCCCAGG CGCTGGCCAA ACCGCTGTGG GATCTCGATG AGGAGAGCGT CACTCAGATC AGCGCGACGG TCGTTTCCCA GGGCGCCATC GTCAAGGTCG AAGTGCGTGA CCAGTCAGGC CAGCTCGACG TCAGCCAGTC CACCATTCCG CGCTCCTTCG ACGGCAAGCT GGTGCAGGTG TCGCGCGCCA TCATCTACAA CACCGTCGAC GGTCCGAAGA ACCTCGGCAG CATCAGCGTC TATTATCCTG CGCTCGGCCT GTTTTCCGGC CTGAAGCAGG AAGAGGTTGT CTTCATCTCG ATCTTCATCT TCGCGGTGCT GACCGTTTTC GGCACGGCGC TGATCGGCAA CCGCTTCTTC GTCATCCAGC CGTTGATGCG GCTGACGGCG GCGATCGAGG CCACCCGCCA GCTGGGCTCC CGCCACCATG TCGACTGGCA GTCGAACGAC GAGATGGGGC GGCTTGCCCA TAGCTTCAAC GAGATGCAGA CCAAGCTCGA AAGCGAGGAA AAGGAGCTGA AGCTTGCCCA CCGCCGCGCC ACCGACATCT ACAATCTGAC GCCCGCCATG CTCTTCTCGC TCGACGAGGA AGACCGCATC ACCGCCGTCA GCGATTATTG GCTGCTTGCC ACGGGTTACA ACCGCGCCGC CATCATCGGC CGCAACTTCG CCGATCTCGT CACTCCCCCG ACCCGCGACA AATTCGTCAA GCGCCGCCAG GGCGAAAGCG GCATGACCGT CACCGTCAAG TTCATCTGCC TGGATGGCCG CACCATGGAC GTCCTTATTA TGGAATCGGA GGCGGGCGCT GGCGCTCAAG ACCGCCTCTC GCTATCGGTC ATGGCCGATG TGACCGAACT CAAGGCCTCC GAGGACCGCA ACCACCGCCA GGCAATCACC GATCACCTGA CCGGTCTTCT CAATCGCCAG GGCTTCGAAG CCGTACTCGA CAACAAGATC GCCGCCGCCG ACGCTGCCGG CCACGAACTC GCCTGCCTCT TCGTCGATCT CGACCGCTTC AAGTGGATCA ACGACAATAT GGGCCACGCC GCCGGCGACA TGGCGCTGAT CGAGCTCGTC GAGCGCCTGA AGACCCATCT TGCCCCCTCC GACGAGGCCG CCCGTCTCGG CGGCGACGAA TTTGCCATCC TGCTGCCGGC GAAGGACGCC GAAAAACGCG CCAAGGTGAT GTGCGAGCAG ATTGCCTCGA TCTTCGAAAC GCCGTTCGCC CCCGACATGC ATCTGAGCGC TTCCGTCGGC ATCGCCATCT ATCCGCATCA TGCCGCAACC GCGGCCGAAC TGCTCCAGAA ATCCGACATG GCGATGTATG CCAAGAAACG CGACGGCAAG AACGGCGCGC AGCTCTTCGA CAATGCCATG CTCGACCGTG CCCGCAGCCG CGCCGAAATC GAGGCCAATA TCGAAGCCGG CCTCGTCGAC AACTGGTTCG AAGCCTTTCT GCAGCCGATC GTTACCCTGA ACGGCCGAGG CATTGCCGGT TTCGAGGCGC TGATGCGCCT CAACCATCCG CAGAAGGGCT TGATGCCGCC GGCCGAGATC ATCAGCGTCG CCGAGGAAAC GGCAAAGATC GTCCGCGTCG GCAACGTCAT CATGGAAAAG GCGATCGCCA ACCTCGCGGA GATTTCCCGC ATATCAGGCA TGCAGGATAC CTATCTCGCC ATCAACTTCT CGCCGTTGCA GTTCGAGCCG GCGCTGCCGG CCCGTCTTGC CGCCATCGTC GGTCGCCACG GCATCCGCCC CGAGCGCATC GTCGTCGAGA TCACCGAAGC CGTGCTGATG CACGACAACC CGCAGATCCG CATGATCGTC ACGGAGCTTC GTCGCTTCGG TTGCCGCATC GCGCTTGACG ATTTCGGCAC CGGCTATTCG TCGCTGAGCT ACCTCAACCG CTTCCCCGTC GACATCATCA AGATCGACCA GTCCTTCACC CGCGCGATCA ACGACGGCGA CGACGACGTG CGCCAGAAGA GCCGCATGCT GATCGAAGGC ATCACCACGC TTTCCCACAA GATGAACTGC ACCGTCATTG CCGAGGGCAT CGAGACCGAA GAGGAATGCC GCACGCTCCA CCAGATGGGG CTTGACTATG GTCAGGGCTA TCTCTTCCAT CGTCCACAGC ACGCAGCCAC GCTGATCGAG CAACTGATGG CCTTGCAGTC GGCCGTCGCA CGCGCCTCGT AA
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Protein sequence | MNNSVENRFF AIVCGALLVF VAPLFVLFLF LSSERADKEI RDHISVLLVA NAQALAKPLW DLDEESVTQI SATVVSQGAI VKVEVRDQSG QLDVSQSTIP RSFDGKLVQV SRAIIYNTVD GPKNLGSISV YYPALGLFSG LKQEEVVFIS IFIFAVLTVF GTALIGNRFF VIQPLMRLTA AIEATRQLGS RHHVDWQSND EMGRLAHSFN EMQTKLESEE KELKLAHRRA TDIYNLTPAM LFSLDEEDRI TAVSDYWLLA TGYNRAAIIG RNFADLVTPP TRDKFVKRRQ GESGMTVTVK FICLDGRTMD VLIMESEAGA GAQDRLSLSV MADVTELKAS EDRNHRQAIT DHLTGLLNRQ GFEAVLDNKI AAADAAGHEL ACLFVDLDRF KWINDNMGHA AGDMALIELV ERLKTHLAPS DEAARLGGDE FAILLPAKDA EKRAKVMCEQ IASIFETPFA PDMHLSASVG IAIYPHHAAT AAELLQKSDM AMYAKKRDGK NGAQLFDNAM LDRARSRAEI EANIEAGLVD NWFEAFLQPI VTLNGRGIAG FEALMRLNHP QKGLMPPAEI ISVAEETAKI VRVGNVIMEK AIANLAEISR ISGMQDTYLA INFSPLQFEP ALPARLAAIV GRHGIRPERI VVEITEAVLM HDNPQIRMIV TELRRFGCRI ALDDFGTGYS SLSYLNRFPV DIIKIDQSFT RAINDGDDDV RQKSRMLIEG ITTLSHKMNC TVIAEGIETE EECRTLHQMG LDYGQGYLFH RPQHAATLIE QLMALQSAVA RAS
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