Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3000 |
Symbol | |
ID | 8013917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2997103 |
End bp | 2998245 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644825570 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_002976798 |
Protein GI | 241205702 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0518762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.592053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAA TATCCGCCTT CCATTTCGCC TCAGCGCTGG TCCTGTTCGG CGCCATGTCC GCGGATGCGG CCGACATCGT CAACACGCAG GATCTCGCGG TCCGTGTCGA CAAGCTCGCC GACGGCCTCC AACATCCCTG GGCGGTCGAA GTGTTGCCCG ACGGGGCCTA TCTCGTCACC GAGCGGCCGG GCCGCATGCG CATCGTCCGC GACGGCAAGG TTTCCGAGCC GATCGGCGGC GTACCCAAGG TCAGCGCTCG TGGTCAGGGC GGCCTGATGG ACGTGGCGCT CGCGCCGGAC TTTGCGAAAT CTCGCAAGCT CTATTTCACC GCCGCCATCG CCAACAGCCA GGGCTCCGGC ACCGAAGCCT TCAGCGCCGC GCTTTCCACT GACGAGAAGA CACTCGACGC CGTGAGGCCT ATCTTCAGCA TGCGGCGCTT CACGTCGGGC AATATCCAGT ACGGCTCGCG CATCGCGATT GCCTCAGACG GTACGCTGTT CATCAGCGTC GGTGATCGCG GCAACCGCGA CCGCTCGCAA GACTGGCAGG ACGATGCCGG CTCGATCATC CACATCAACG CCGATGGCAG CATTCCTGCC GACAATCCAT TCAAGGAAGG CGGCAAGGCG CTGCCGGAAA TCTGGTCGAA AGGTCACCGC AACCCGCAGG GCATCACCTT CGACGCCAAA GATGGCAAGC TCTATACCGT CGAACACGGT GCGCGCGGCG GCGACGAGAT CAACCAGCCC GAGGCCGGCA AGAATTACGG CTGGCCGATC ATCACCTATG GCCGCGACTA TTCGGGTGCC GAGATCGGTG AAGGCACCGC CAAGGACGGG CTGGAACAGC CGCTCCATTA CTGGGATCCT TCGATCGCAC CAGGCGCCCT CGTCGTCTAT CGTGGCGCCA TGTTCCCGGA ATGGGACGGC AATTTCCTCG TCGCGGCGCT GAAGTTCCAA CTGCTCTCGC GCATGCAGCG CGACGACGGC GGCGCCTTCG TCACCGAAGA GCGCCTGTTC GAGGGCGAAT ACGGCCGCAT CCGCGACGTC GTCGTCGCCC CCGACGGCGC CCTGCTGATG GTGACGGATG AGGACAACGG CGCGCTGCTC AGGATATCCC GAGCGCAAGC CCGCAACGGC TGA
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Protein sequence | MKRISAFHFA SALVLFGAMS ADAADIVNTQ DLAVRVDKLA DGLQHPWAVE VLPDGAYLVT ERPGRMRIVR DGKVSEPIGG VPKVSARGQG GLMDVALAPD FAKSRKLYFT AAIANSQGSG TEAFSAALST DEKTLDAVRP IFSMRRFTSG NIQYGSRIAI ASDGTLFISV GDRGNRDRSQ DWQDDAGSII HINADGSIPA DNPFKEGGKA LPEIWSKGHR NPQGITFDAK DGKLYTVEHG ARGGDEINQP EAGKNYGWPI ITYGRDYSGA EIGEGTAKDG LEQPLHYWDP SIAPGALVVY RGAMFPEWDG NFLVAALKFQ LLSRMQRDDG GAFVTEERLF EGEYGRIRDV VVAPDGALLM VTDEDNGALL RISRAQARNG
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