Gene Rleg_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2973 
SymbolcarB 
ID8013895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2965631 
End bp2969119 
Gene Length3489 bp 
Protein Length1162 aa 
Translation table11 
GC content63% 
IMG OID644825543 
Productcarbamoyl phosphate synthase large subunit 
Protein accessionYP_002976771 
Protein GI241205675 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) 
TIGRFAM ID[TIGR01369] carbamoyl-phosphate synthase, large subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0567319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGC GCCAAGACAT CAAATCGATC CTTATCATCG GCGCGGGACC GATCGTCATC 
GGCCAGGCTT GCGAGTTCGA CTATTCCGGC ACCCAAGCCT GCAAGGCGCT GAAGGAGGAA
GGCTACCGCG TCATCCTCGT CAACTCCAAC CCGGCGACGA TCATGACCGA TCCGGGTCTT
GCCGACGCCA CCTATGTCGA GCCGATTACC CCCGAAGTCG TCGCCAAGAT CATAGCCAAG
GAGCGCCCGG ATGCGCTGCT GCCGACCATG GGCGGCCAGA CGGCGCTGAA CACGGCGCTT
TCGCTGAAGC GCATGGGCGT GCTCGACCGC TACAATGTCG AGATGATCGG CGCCAAGCCC
GCCGCCATCG ACATGGCCGA GGACCGCGCG CTGTTTCGCG AGGCGATGGC CCGTATCGGC
CTCGAAACCC CGCGCTCGAT GCTGGCGAAC GCCACCGACA TCAAGGACCT CGACCGCAAG
ACGCACGAGG CCGAGCGCAT CAAGCTGCGC GAAAGCCTCT CCGGATCCGA CCTCGACAAG
GCGCTGGACG AGCTGGAAAA CCAGTGGAAC CTCGGCGAGA GCGACCGCAA GCAGCGTTAC
ATGAGCCATG CCATGGCAAT TGCCGCCCAG GCGATCGACC ATGTCGGCCT GCCCGCCATC
ATCCGTCCCT CCTTCACGCT CGGCGGCACT GGCGGCGGCA TCGCCTACAA CCGCTCGGAA
TTCTTCGAGA TCGTCGGCGG CGGCCTCGAT GCCTCGCCGA CCACCGAAGT GCTGGTCGAA
GAATCGGTGC TAGGTTGGAA GGAATATGAA ATGGAGGTCG TCCGCGACAA GGCGGACAAC
TGCATCATCA TCTGCTCGAT CGAGAACATC GACCCGATGG GCGTCCATAC TGGCGATTCG
ATCACCGTCG CGCCGGCGCT GACGCTGACG GACAAGGAAT ACCAGATCAT GCGCAACGCC
TCGATCGCGG TGCTGCGCGA GATTGGGGTC GAGACCGGCG GCTCGAACGT CCAGTTCGCC
GTCAATCCGA AGGACGGCCG TCTCGTCGTC ATCGAAATGA ACCCGCGTGT TTCGCGCTCG
TCGGCGCTCG CCTCCAAGGC CACCGGTTTC CCGATCGCCA AGATCGCCGC CAAGCTGGCG
ATCGGCTATA CGCTCGACGA ACTGGATAAC GACATCACCG GCGGCGCAAC GCCTGCCTCC
TTCGAACCGT CGATCGACTA CGTCGTCACC AAGATCCCGC GTTTCGCCTT CGAGAAATTC
CCCGGTGCCT CGCCGGTGCT GACGACCGCG ATGAAATCGG TCGGTGAAGT CATGGCGATC
GGCCGCACCT TTGCCGAATC GCTGCAGAAG GCACTGCGTG GCTTGGAAAC CGGCCTGACG
GGCCTCGACG AGATCGAGAT CCCCGGCTTC GAAGAGGGCG AATCCAGCCA GAACGCTATC
CGCGCCGCAA TCGGCACACC GACGCCCGAT CGCCTGCGCA TGGTCGCCCA GGCGCTACGC
CAGGGCATGA GCGAAGCTGA AGTCCACGAA GGCTGCAAGA TCGATCCCTG GTTCATCGCT
GAACTGAAGG CGATCGTCGA GATGGAGGCC CGCATCCGCG AGCACGGCCT GCCGCAGGAT
GCCACAAACC TGCGCATGCT GAAGGCCATG GGCTTCTCCG ACGCGCGCCT GGCGACGCTG
ACCGGCAAGC GCCCGAAGGA AGTCGCCGAA TTCCGTAACA AGCTGAATGT CCGCCCCGTC
TTCAAGCGCA TCGACACCTG TGCGGCCGAA TTCGCCTCGC CGACCGCCTA CATGTATTCG
ACCTATGAGA CGCCTTTCGT CGGCGCCGCC CGCTCCGAGG CTGAAGTCTC CGACCGCAAG
AAGGTTGTCA TCCTCGGCGG TGGCCCGAAC CGCATCGGCC AGGGCATCGA GTTCGATTAT
TGCTGCTGCC ACGCTGCCTT CGCCTTGAAG GATGCGGGTT ATGAAGCGAT CATGATCAAC
TGCAACCCGG AAACCGTTTC GACCGACTAC GATACCTCGG ACCGCCTCTA TTTCGAGCCA
CTGACGGCCG AGGACGTGAT CGAGATCCTG CGGGCAGAAC AGGAAAAGGG CGAAGTCGTC
GGCGTCATCG TCCAGTTCGG CGGCCAGACG CCGCTGAAGC TTGCCGAGGC GCTGGAAAAG
AACGGCATCC CGATCCTCGG TACCGCGCCT GACATGATCG ACCTTGCCGA GGACCGCGAC
CGCTTCCAGA AGCTGTTGAT GAAGCTCGAC CTCAACCAGC CGAACAACGG CATCGCCTAT
TCGGTTGAGC AGGCCCGCAT GGTCGCCACC GAAATCGGCT TCCCGCTGGT CGTGCGTCCC
TCTTACGTGC TCGGCGGCCG CGCCATGCAG ATCCTGCATT CGGAAGGACA ATTGCAGAGC
TACCTGCTCG ATACCGTGCC TGAACTGGTA CCTGAGGATA TCAAGCAGCG CTACCCCAAC
GACAAGACCG GCCAGATCAA CACCCTGCTC GGCAAGAACC CGCTGCTCTT CGACAGCTAC
CTCAGCCACG CCATCGAAGT CGATGTCGAC TGCCTCTCGG ACGGCACCGA CGTCTATGTC
GCCGGCATCA TGGAGCATAT CGAGGAAGCC GGCATCCATT CCGGCGACAG CGCCTGCTCG
CTGCCGCCGC GCACGCTCTC CAACGAGATG CTAGACGAGC TGGAGCGCCA GGCCAAGGCG
ATGGCCAAAG CCCTCAATGT CGGCGGCCTG ATGAACGTCC AGTTCGCCAT CAAGGACGAT
GTCGTCTACG TGCTCGAAGT CAATCCGCGC GCCTCGCGCA CCGTGCCCTT CGTCGCAAAG
ACCATCGGCG CGCCGATCGC CAAGATCGCC GCCCGCGTCA TGGCCGGCGA GAAACTCGAT
GCCACCTTCG CCGCCTACGG CGAGAAGCCC GATCCGCGCA AGCTGAAGCA CATCGCCGTC
AAGGAAGCCG TCTTCCCCTT CGCCCGCTTC CCCGGCGTCG ACACGCTGCT CGGCCCGGAA
ATGCGCTCGA CCGGTGAAGT CATCGGCCTC GATACCGATT TTGCGCTGGC CTTCGCCAAG
TCGCAGCTCG GCGCCGGCGT CGAGCTGCCG CGTGACGGGA CGGTCTTTGT CTCCGTCCGC
GACGCGGACA AGCCGCGCGT GCTGCCGGCG ATCCACATCC TCGTCGAGCA GGGCTTCAAA
GTGCTGGCAA CCGGCGGCAC CGCCCGCTTC CTCGGCGAAA ACGGCATCAC CGCCACGAAG
ATCAACAAGG TGCTCGAAGG CCGTCCGCAC ATCGAGGACG CAATCCGCAA CCGCCAGGTC
CAGCTCGTCA TCAACACCAC CGATGGCAAC AAGGCGATCT CGGACTCCAA GTCGTTGCGC
CGTGCGACGC TGATGCAGAA GGTGCCTTAC TACACGACGA TGGCAGGCGC CGAGGCCGCC
GCCCAGGCGA TCAAGGCGCT GAAAGCCGGC AATCTGGAAG TGCGGCCGTT GCAGAGCTAC
TTCGCCTGA
 
Protein sequence
MPKRQDIKSI LIIGAGPIVI GQACEFDYSG TQACKALKEE GYRVILVNSN PATIMTDPGL 
ADATYVEPIT PEVVAKIIAK ERPDALLPTM GGQTALNTAL SLKRMGVLDR YNVEMIGAKP
AAIDMAEDRA LFREAMARIG LETPRSMLAN ATDIKDLDRK THEAERIKLR ESLSGSDLDK
ALDELENQWN LGESDRKQRY MSHAMAIAAQ AIDHVGLPAI IRPSFTLGGT GGGIAYNRSE
FFEIVGGGLD ASPTTEVLVE ESVLGWKEYE MEVVRDKADN CIIICSIENI DPMGVHTGDS
ITVAPALTLT DKEYQIMRNA SIAVLREIGV ETGGSNVQFA VNPKDGRLVV IEMNPRVSRS
SALASKATGF PIAKIAAKLA IGYTLDELDN DITGGATPAS FEPSIDYVVT KIPRFAFEKF
PGASPVLTTA MKSVGEVMAI GRTFAESLQK ALRGLETGLT GLDEIEIPGF EEGESSQNAI
RAAIGTPTPD RLRMVAQALR QGMSEAEVHE GCKIDPWFIA ELKAIVEMEA RIREHGLPQD
ATNLRMLKAM GFSDARLATL TGKRPKEVAE FRNKLNVRPV FKRIDTCAAE FASPTAYMYS
TYETPFVGAA RSEAEVSDRK KVVILGGGPN RIGQGIEFDY CCCHAAFALK DAGYEAIMIN
CNPETVSTDY DTSDRLYFEP LTAEDVIEIL RAEQEKGEVV GVIVQFGGQT PLKLAEALEK
NGIPILGTAP DMIDLAEDRD RFQKLLMKLD LNQPNNGIAY SVEQARMVAT EIGFPLVVRP
SYVLGGRAMQ ILHSEGQLQS YLLDTVPELV PEDIKQRYPN DKTGQINTLL GKNPLLFDSY
LSHAIEVDVD CLSDGTDVYV AGIMEHIEEA GIHSGDSACS LPPRTLSNEM LDELERQAKA
MAKALNVGGL MNVQFAIKDD VVYVLEVNPR ASRTVPFVAK TIGAPIAKIA ARVMAGEKLD
ATFAAYGEKP DPRKLKHIAV KEAVFPFARF PGVDTLLGPE MRSTGEVIGL DTDFALAFAK
SQLGAGVELP RDGTVFVSVR DADKPRVLPA IHILVEQGFK VLATGGTARF LGENGITATK
INKVLEGRPH IEDAIRNRQV QLVINTTDGN KAISDSKSLR RATLMQKVPY YTTMAGAEAA
AQAIKALKAG NLEVRPLQSY FA