Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2973 |
Symbol | carB |
ID | 8013895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2965631 |
End bp | 2969119 |
Gene Length | 3489 bp |
Protein Length | 1162 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644825543 |
Product | carbamoyl phosphate synthase large subunit |
Protein accession | YP_002976771 |
Protein GI | 241205675 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0567319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGC GCCAAGACAT CAAATCGATC CTTATCATCG GCGCGGGACC GATCGTCATC GGCCAGGCTT GCGAGTTCGA CTATTCCGGC ACCCAAGCCT GCAAGGCGCT GAAGGAGGAA GGCTACCGCG TCATCCTCGT CAACTCCAAC CCGGCGACGA TCATGACCGA TCCGGGTCTT GCCGACGCCA CCTATGTCGA GCCGATTACC CCCGAAGTCG TCGCCAAGAT CATAGCCAAG GAGCGCCCGG ATGCGCTGCT GCCGACCATG GGCGGCCAGA CGGCGCTGAA CACGGCGCTT TCGCTGAAGC GCATGGGCGT GCTCGACCGC TACAATGTCG AGATGATCGG CGCCAAGCCC GCCGCCATCG ACATGGCCGA GGACCGCGCG CTGTTTCGCG AGGCGATGGC CCGTATCGGC CTCGAAACCC CGCGCTCGAT GCTGGCGAAC GCCACCGACA TCAAGGACCT CGACCGCAAG ACGCACGAGG CCGAGCGCAT CAAGCTGCGC GAAAGCCTCT CCGGATCCGA CCTCGACAAG GCGCTGGACG AGCTGGAAAA CCAGTGGAAC CTCGGCGAGA GCGACCGCAA GCAGCGTTAC ATGAGCCATG CCATGGCAAT TGCCGCCCAG GCGATCGACC ATGTCGGCCT GCCCGCCATC ATCCGTCCCT CCTTCACGCT CGGCGGCACT GGCGGCGGCA TCGCCTACAA CCGCTCGGAA TTCTTCGAGA TCGTCGGCGG CGGCCTCGAT GCCTCGCCGA CCACCGAAGT GCTGGTCGAA GAATCGGTGC TAGGTTGGAA GGAATATGAA ATGGAGGTCG TCCGCGACAA GGCGGACAAC TGCATCATCA TCTGCTCGAT CGAGAACATC GACCCGATGG GCGTCCATAC TGGCGATTCG ATCACCGTCG CGCCGGCGCT GACGCTGACG GACAAGGAAT ACCAGATCAT GCGCAACGCC TCGATCGCGG TGCTGCGCGA GATTGGGGTC GAGACCGGCG GCTCGAACGT CCAGTTCGCC GTCAATCCGA AGGACGGCCG TCTCGTCGTC ATCGAAATGA ACCCGCGTGT TTCGCGCTCG TCGGCGCTCG CCTCCAAGGC CACCGGTTTC CCGATCGCCA AGATCGCCGC CAAGCTGGCG ATCGGCTATA CGCTCGACGA ACTGGATAAC GACATCACCG GCGGCGCAAC GCCTGCCTCC TTCGAACCGT CGATCGACTA CGTCGTCACC AAGATCCCGC GTTTCGCCTT CGAGAAATTC CCCGGTGCCT CGCCGGTGCT GACGACCGCG ATGAAATCGG TCGGTGAAGT CATGGCGATC GGCCGCACCT TTGCCGAATC GCTGCAGAAG GCACTGCGTG GCTTGGAAAC CGGCCTGACG GGCCTCGACG AGATCGAGAT CCCCGGCTTC GAAGAGGGCG AATCCAGCCA GAACGCTATC CGCGCCGCAA TCGGCACACC GACGCCCGAT CGCCTGCGCA TGGTCGCCCA GGCGCTACGC CAGGGCATGA GCGAAGCTGA AGTCCACGAA GGCTGCAAGA TCGATCCCTG GTTCATCGCT GAACTGAAGG CGATCGTCGA GATGGAGGCC CGCATCCGCG AGCACGGCCT GCCGCAGGAT GCCACAAACC TGCGCATGCT GAAGGCCATG GGCTTCTCCG ACGCGCGCCT GGCGACGCTG ACCGGCAAGC GCCCGAAGGA AGTCGCCGAA TTCCGTAACA AGCTGAATGT CCGCCCCGTC TTCAAGCGCA TCGACACCTG TGCGGCCGAA TTCGCCTCGC CGACCGCCTA CATGTATTCG ACCTATGAGA CGCCTTTCGT CGGCGCCGCC CGCTCCGAGG CTGAAGTCTC CGACCGCAAG AAGGTTGTCA TCCTCGGCGG TGGCCCGAAC CGCATCGGCC AGGGCATCGA GTTCGATTAT TGCTGCTGCC ACGCTGCCTT CGCCTTGAAG GATGCGGGTT ATGAAGCGAT CATGATCAAC TGCAACCCGG AAACCGTTTC GACCGACTAC GATACCTCGG ACCGCCTCTA TTTCGAGCCA CTGACGGCCG AGGACGTGAT CGAGATCCTG CGGGCAGAAC AGGAAAAGGG CGAAGTCGTC GGCGTCATCG TCCAGTTCGG CGGCCAGACG CCGCTGAAGC TTGCCGAGGC GCTGGAAAAG AACGGCATCC CGATCCTCGG TACCGCGCCT GACATGATCG ACCTTGCCGA GGACCGCGAC CGCTTCCAGA AGCTGTTGAT GAAGCTCGAC CTCAACCAGC CGAACAACGG CATCGCCTAT TCGGTTGAGC AGGCCCGCAT GGTCGCCACC GAAATCGGCT TCCCGCTGGT CGTGCGTCCC TCTTACGTGC TCGGCGGCCG CGCCATGCAG ATCCTGCATT CGGAAGGACA ATTGCAGAGC TACCTGCTCG ATACCGTGCC TGAACTGGTA CCTGAGGATA TCAAGCAGCG CTACCCCAAC GACAAGACCG GCCAGATCAA CACCCTGCTC GGCAAGAACC CGCTGCTCTT CGACAGCTAC CTCAGCCACG CCATCGAAGT CGATGTCGAC TGCCTCTCGG ACGGCACCGA CGTCTATGTC GCCGGCATCA TGGAGCATAT CGAGGAAGCC GGCATCCATT CCGGCGACAG CGCCTGCTCG CTGCCGCCGC GCACGCTCTC CAACGAGATG CTAGACGAGC TGGAGCGCCA GGCCAAGGCG ATGGCCAAAG CCCTCAATGT CGGCGGCCTG ATGAACGTCC AGTTCGCCAT CAAGGACGAT GTCGTCTACG TGCTCGAAGT CAATCCGCGC GCCTCGCGCA CCGTGCCCTT CGTCGCAAAG ACCATCGGCG CGCCGATCGC CAAGATCGCC GCCCGCGTCA TGGCCGGCGA GAAACTCGAT GCCACCTTCG CCGCCTACGG CGAGAAGCCC GATCCGCGCA AGCTGAAGCA CATCGCCGTC AAGGAAGCCG TCTTCCCCTT CGCCCGCTTC CCCGGCGTCG ACACGCTGCT CGGCCCGGAA ATGCGCTCGA CCGGTGAAGT CATCGGCCTC GATACCGATT TTGCGCTGGC CTTCGCCAAG TCGCAGCTCG GCGCCGGCGT CGAGCTGCCG CGTGACGGGA CGGTCTTTGT CTCCGTCCGC GACGCGGACA AGCCGCGCGT GCTGCCGGCG ATCCACATCC TCGTCGAGCA GGGCTTCAAA GTGCTGGCAA CCGGCGGCAC CGCCCGCTTC CTCGGCGAAA ACGGCATCAC CGCCACGAAG ATCAACAAGG TGCTCGAAGG CCGTCCGCAC ATCGAGGACG CAATCCGCAA CCGCCAGGTC CAGCTCGTCA TCAACACCAC CGATGGCAAC AAGGCGATCT CGGACTCCAA GTCGTTGCGC CGTGCGACGC TGATGCAGAA GGTGCCTTAC TACACGACGA TGGCAGGCGC CGAGGCCGCC GCCCAGGCGA TCAAGGCGCT GAAAGCCGGC AATCTGGAAG TGCGGCCGTT GCAGAGCTAC TTCGCCTGA
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Protein sequence | MPKRQDIKSI LIIGAGPIVI GQACEFDYSG TQACKALKEE GYRVILVNSN PATIMTDPGL ADATYVEPIT PEVVAKIIAK ERPDALLPTM GGQTALNTAL SLKRMGVLDR YNVEMIGAKP AAIDMAEDRA LFREAMARIG LETPRSMLAN ATDIKDLDRK THEAERIKLR ESLSGSDLDK ALDELENQWN LGESDRKQRY MSHAMAIAAQ AIDHVGLPAI IRPSFTLGGT GGGIAYNRSE FFEIVGGGLD ASPTTEVLVE ESVLGWKEYE MEVVRDKADN CIIICSIENI DPMGVHTGDS ITVAPALTLT DKEYQIMRNA SIAVLREIGV ETGGSNVQFA VNPKDGRLVV IEMNPRVSRS SALASKATGF PIAKIAAKLA IGYTLDELDN DITGGATPAS FEPSIDYVVT KIPRFAFEKF PGASPVLTTA MKSVGEVMAI GRTFAESLQK ALRGLETGLT GLDEIEIPGF EEGESSQNAI RAAIGTPTPD RLRMVAQALR QGMSEAEVHE GCKIDPWFIA ELKAIVEMEA RIREHGLPQD ATNLRMLKAM GFSDARLATL TGKRPKEVAE FRNKLNVRPV FKRIDTCAAE FASPTAYMYS TYETPFVGAA RSEAEVSDRK KVVILGGGPN RIGQGIEFDY CCCHAAFALK DAGYEAIMIN CNPETVSTDY DTSDRLYFEP LTAEDVIEIL RAEQEKGEVV GVIVQFGGQT PLKLAEALEK NGIPILGTAP DMIDLAEDRD RFQKLLMKLD LNQPNNGIAY SVEQARMVAT EIGFPLVVRP SYVLGGRAMQ ILHSEGQLQS YLLDTVPELV PEDIKQRYPN DKTGQINTLL GKNPLLFDSY LSHAIEVDVD CLSDGTDVYV AGIMEHIEEA GIHSGDSACS LPPRTLSNEM LDELERQAKA MAKALNVGGL MNVQFAIKDD VVYVLEVNPR ASRTVPFVAK TIGAPIAKIA ARVMAGEKLD ATFAAYGEKP DPRKLKHIAV KEAVFPFARF PGVDTLLGPE MRSTGEVIGL DTDFALAFAK SQLGAGVELP RDGTVFVSVR DADKPRVLPA IHILVEQGFK VLATGGTARF LGENGITATK INKVLEGRPH IEDAIRNRQV QLVINTTDGN KAISDSKSLR RATLMQKVPY YTTMAGAEAA AQAIKALKAG NLEVRPLQSY FA
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