Gene Rleg_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2962 
SymboldnaG 
ID8013886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2952651 
End bp2954660 
Gene Length2010 bp 
Protein Length669 aa 
Translation table11 
GC content64% 
IMG OID644825532 
ProductDNA primase 
Protein accessionYP_002976760 
Protein GI241205664 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.137864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTT CCAACACCTT TCTCGATGAT ATTCGCGACC GCGTTCCGAT TTCGAACGTG 
ATTGCGCGTC GCGTCAGCTG GGACAAGCGC AAGACAAACG TGTCGCGCGG CGATTACTGG
GCCTGCTGCC CGTTCCACGG CGAGAAATCG CCGAGCTTCC ATTGCGAGGA CCGAAAGGGC
CGCTATCACT GCTTCGGCTG CGGCGTCACC GGCGACCATT TCCGCTTTCT CACCGAGCTG
GAGGGCCTGA GTTTCCCCGA GGCGGTGCAG CAGATCGCCG ATATGGCCGG CGTGCCGATG
CCACTGGCCG ATCCTGTGAT GGAGAAGCGC GAGAAAGAGC GCGGCTCGCT GATCGACGTC
ATGGAAATGG CGACGCAATT TTTCCAGGAT CAGCTGCAGA CGTCGAATGG GGCGAGGGCG
CGCGCCTATC TGCGCGACCG CGGATTGACG GGGCGCACCA TCGAGACCTT CCGTCTCGGC
TATGCACCCG ACAGCCGCAA TGCGCTCAAG GAATTCCTCG CCGGCAAGGG TGTCTCCAAG
GATCAGATCG AGGCCTGCGG TCTGGTTGTC CATGAAAACG TGCCGGTTTC CTACGATCGT
TTCCGCGACC GCATCATGTT CCCGATCCTG TCGTCGCGGG AAAAGGTGAT CGCTTTCGGC
GGCCGCGCCA TGTCGGCTGA CGCGCCGGCG AAATATCTGA ACTCCAACGA GACGGAGCTC
TTCCACAAGG GCAATGTCCT TTACAATTTC GCCCGTGCGC GGCGCGCGAT CCAGGGACCG
GGCCGCGGCG ACCCTCAGGA CGATAATGCG ACCGGCACCA TTATTGCCGT CGAAGGCTAT
ATGGACGTGA TCGCGCTGCA TCAGGCGGGC ATCGAGAATG CCGTCGCGCC GCTCGGCACG
GCGCTCACCG AAAACCAGCT CGAGTTGCTG TGGAAGATGG TGCCGCAGCC GATGCTCTGC
TTCGACGGCG ACGGCGCCGG CATCCGCGCG GCCAATCGCG CCGCCGAACT GGCGCTGCCG
CATCTGAAGC CCGGGCGTTC TGTTCGCTTC GCGCTTCTGC CCGACGGCAA GGATCCCGAC
GATCTCGTGC GCGATGACGG GCGCGCGCCT TTCGACAAGG TAATGAGCCA GGCAAAGCCG
CTCTCCGAGA TGCTGTGGAG CCGGGAGGTC AACACCGGCA AGTTCGACAC GCCGGAGGCG
CGCGCCGAGC TCGAGGCGCG GCTGAAGCAA CTGGTCGCCG TCATCGCAGA CGAGAATGTG
CGTCGCCACT ACCAGCAGGA TATTCGCGAT CGGCTGAACG CCTTCTTCCA GCCGCAGTTC
CAGAACCGCA ACAATGGCGA TCGCCGCGGC GGCTTCAACG GCAATGGCAA TTACCGGACG
GGCCGCGACA ATGCGGGCAA GGCAGGGCCG AAAAGCCCCA GCGTCATTTC AGAAAGGCTC
GCCCGCTCAG GCCCCGTGCG CGGCCACCAG AACAATACGG CGCTGCGCGA ATGCGTGCTG
GCGCTGACCG TCGTCAATCA CCCTTCGCTG ATGATCGACG ATTATGACGA AATAGCCGCG
ATTGAATATG ACAGCCGCGA GCTGCAGCGG CTCTGGTCGG CGATGCTGGG AGCAGCCGCG
GCCGTCGCCG GCCCGCATCT GACGCGCGAA TATCTGACCG AAAGACTGGA ATTCGAAGGC
TTCGGCCCGC TCATCAAGAG CCTCGACCAA CAGGTGCGCA ATGCCCGGCT GTGGATCGCG
ACCGAGGAGG CGGCGATGGA AGATGCGCGT GAGGGATACC GCCAGGCGCT GGCCTCCCAC
AAGCGAGCGA AGGCGCTACG CCGGCAGAAG ATCGAGCTCG AGCGCGAGAT CGCGCTGGCA
ACCGAAGCCG GCGACGGCGA GGCGATCGTT CAACTGATGC GCGCGCAGCA GGAAGTGCAT
TTTGAAGGGG TGCGCCTTGA GAACCAGGAG GCCATCATCG ATGGCTTCGG CGTGCTTTCC
GGCCGCGTCA AAGGAGCGGC GAACCACTGA
 
Protein sequence
MRFSNTFLDD IRDRVPISNV IARRVSWDKR KTNVSRGDYW ACCPFHGEKS PSFHCEDRKG 
RYHCFGCGVT GDHFRFLTEL EGLSFPEAVQ QIADMAGVPM PLADPVMEKR EKERGSLIDV
MEMATQFFQD QLQTSNGARA RAYLRDRGLT GRTIETFRLG YAPDSRNALK EFLAGKGVSK
DQIEACGLVV HENVPVSYDR FRDRIMFPIL SSREKVIAFG GRAMSADAPA KYLNSNETEL
FHKGNVLYNF ARARRAIQGP GRGDPQDDNA TGTIIAVEGY MDVIALHQAG IENAVAPLGT
ALTENQLELL WKMVPQPMLC FDGDGAGIRA ANRAAELALP HLKPGRSVRF ALLPDGKDPD
DLVRDDGRAP FDKVMSQAKP LSEMLWSREV NTGKFDTPEA RAELEARLKQ LVAVIADENV
RRHYQQDIRD RLNAFFQPQF QNRNNGDRRG GFNGNGNYRT GRDNAGKAGP KSPSVISERL
ARSGPVRGHQ NNTALRECVL ALTVVNHPSL MIDDYDEIAA IEYDSRELQR LWSAMLGAAA
AVAGPHLTRE YLTERLEFEG FGPLIKSLDQ QVRNARLWIA TEEAAMEDAR EGYRQALASH
KRAKALRRQK IELEREIALA TEAGDGEAIV QLMRAQQEVH FEGVRLENQE AIIDGFGVLS
GRVKGAANH