Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2950 |
Symbol | |
ID | 8013876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2939872 |
End bp | 2940678 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644825520 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002976748 |
Protein GI | 241205652 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0105763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.912836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAA ATCAGTTCAG GATGCTGCGC TCGGCGCTGG CAGGCGTCGA AGCGGTAGAA GCGGAAACGC ATCACAGCTT TGCGCGGCAT ACGCATGAGC AGTTCGGCAT CGGTTTGATT TCCGCCGGGG CGCAGTCGTC GCTCAGCGGC CGCGGCATGG TGGAGGCAGA GGCCGGCGAC ATCATCACGG TCAATCCGAA CGAAGTGCAT GACGGCGCGC CGATCGGCGA GGGGCGGTCG TGGCGCATCC TCTATTTCGA TCCCGCCATC GTCAGCGGTC TGTCACGAGA GATCACCGAA AGCGGGGTAG GGCGATCGGA AATCCCGCAT CCCGTTATCC GCAATGCGGC GATCGCCGCC CGCTTCGAAA TGCTGTTTGG CGCGGTGACC GGCGGCGGGA CGGCGGAGGG GTTGCTCTGC GACGAACTGC TTCTGCAACT CGTCGCCGAT GTTATGCGGG AGCGCTCTGG TACCGAAGAG CGGCCACTGG TGCCGGCGTC GATCCGCGCG GCTCGAAACC TGATCGACGA CGATCCGCTT GCCGCCGTCT CGCTTGACGA TCTCTCCAGG GAAAGCGGGC TCAGCCGTTT CCAGGTGCTG CGCGGTTTTG CCAAGGCGAC CGGATTGACG CCGCATGCCT ATCTCGTCCA GGCCCGCATC CATATCGCCC GACGAATGAT CGCTCAGGGC ATGCCGCTTG CGGAAGCGGC CTTTGCCAGC GGCTTTGCCG ACCAGAGCCA CATGACGCGG GTCTTCGTGC GCAAATACGG CCTGTCGCCG CGTCTCTATG CCGGCGCCTT TCTCTGA
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Protein sequence | MAKNQFRMLR SALAGVEAVE AETHHSFARH THEQFGIGLI SAGAQSSLSG RGMVEAEAGD IITVNPNEVH DGAPIGEGRS WRILYFDPAI VSGLSREITE SGVGRSEIPH PVIRNAAIAA RFEMLFGAVT GGGTAEGLLC DELLLQLVAD VMRERSGTEE RPLVPASIRA ARNLIDDDPL AAVSLDDLSR ESGLSRFQVL RGFAKATGLT PHAYLVQARI HIARRMIAQG MPLAEAAFAS GFADQSHMTR VFVRKYGLSP RLYAGAFL
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