Gene Rleg_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2918 
Symbol 
ID8013845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2916098 
End bp2917012 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content61% 
IMG OID644825488 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002976717 
Protein GI241205621 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.241078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA TCGCAGCGGA AACGGAGGAG GATGGCCAGG GCGCGCGCGG CGGGCGCGGA 
CTGAGGCTTT CCCCATCGGC GATCTCCTAT CTCCAGGCGA CGCCGCTGTT CGTCATTCTC
GGCTTGTTCT TCCTGCTGCC AATCGCCATG ATCGCGGTCG TCAGCTTCTG GGACTACGAC
TTTGCCGGTC TCTATCCCGA TTTCCTGACG ATGAACTACA CCGACACGCT CGGTTCGTGG
GTGACGTGGA AGATCTATCT CAACACGCTG AAATTCACTG CGATCGTCTG GGCGCTGACG
CTCGTCATCG GTTTCTGGGT CGCCTATTTC CTGGCCTTCC ACGTCCGCAA GACCTCGACG
CAGATGATCC TCTTCCTCGT CTGCACCGTG CCGTTCATGA CCTCGAACAT CATCCGCATG
ATCTCGTGGA TCCCGGTGCT CGGGCGCAAC GGCCTCGTCA ATTCGACGCT GATCAAGATG
GGCATCATCC CGCAGCCGAT CGAATGGCTG CTCTATTCCG ATTTCGCCGT CGTGCTCGCC
ATGGTGCACC TCTATACGCT GTTTATGGTG ACGCCGATCT TCAACACGCT CATGCGCATC
GACCGATCGC TGTTCGAGGC GGCGCGCGAT GCCGGCGCCT CCGGCTGGCA GGTGTTGTGG
AACGTCGTCT TCCCGCTCGC CAAACCCGGC ATGGCGATCG GCACGATCTT CGTCGTCACG
CTCGTCATGG CTGACTTTTC GACGGTGCAG GTGATGTCCG GCGGCCAGAG CGCTTCGGTG
GCGCTGATGA TGAAGAACCA GATGTCGCTG CTGCAATATC CGGCCGCTGC CGCCAATGCA
GTGGTGCTGC TCGCCGTCGT GCTGTTGATG GTCGCGGCCA TCCTGCGCGT CGTCGACATC
CGCAAGGAGC TTTGA
 
Protein sequence
MATIAAETEE DGQGARGGRG LRLSPSAISY LQATPLFVIL GLFFLLPIAM IAVVSFWDYD 
FAGLYPDFLT MNYTDTLGSW VTWKIYLNTL KFTAIVWALT LVIGFWVAYF LAFHVRKTST
QMILFLVCTV PFMTSNIIRM ISWIPVLGRN GLVNSTLIKM GIIPQPIEWL LYSDFAVVLA
MVHLYTLFMV TPIFNTLMRI DRSLFEAARD AGASGWQVLW NVVFPLAKPG MAIGTIFVVT
LVMADFSTVQ VMSGGQSASV ALMMKNQMSL LQYPAAAANA VVLLAVVLLM VAAILRVVDI
RKEL