Gene Rleg_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2917 
Symbol 
ID8015740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2915275 
End bp2916096 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content61% 
IMG OID644825487 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002976716 
Protein GI241205620 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG AAAAACGCGG CCTGGAATTC TATCTGTTGG CGCTCTTCTT CATCATCTTC 
GTGCTGTTTC TCTACGGCCC GCTTTCGGCG ATCCTGATCC TCTCCTTCCA GGGGCCGGAC
GGCGGCCTGA CCTTCCCGAT GAACGGTATT TCCACGCACT GGTTCTTCAA TCTGTTCGAG
AAGCAGGCGG TCGGCGATTT CGGCGCCTCG TTCCGCCGCT CCTTCACCCT CGGGCTGATG
GTGATGGCGG TGACCGTCGT CGTCTCACTG CTCGCCGGCC TTGCCTTCCG CCGCCGTTTC
CGCGGTTCGA CCGCGCTGTT CTATGCCACG GTCGCAAGCC TTGTCGTGCC GTCGATCATC
ATCTCGCTCG GCATCGGCGT CGTTTTCCAG GAGGGAGGGC TGAAGCCCGC CTGGTATTCG
TCGGCCTTCG GCGCGCATCT CACCTGGACG CTGCCGTTCG GCGTGCTGAT CATGTTTGCC
GTCTTCAACC GCTTTTCGCC GGCCTATGAA GAGGCGGCGC GTGACCTCGG CGCCAGCTCC
TGGCAGACGT TCCGCCATGT CGTGCTGCCG ATGATCGCGC CGAGCCTCAT CGGCGTCGGC
CTGTTCGGCT TCACGCTCTC CTATGACGAA TTCGCCCGCA CGCTGATGAC ATCAGGCACC
TACAACACGC TGCCGCTTGA AATCTACGGC ATGACCACCA ACGTCACGAC GCCGGTGCTC
TATGCGCTCG GCACCGTGAC GACGCTGTTT TCCTTCACCA TCATTCTCAT CGCACTCGGC
ATCATGACGA TGCTCAGCCG GCGGCAGGCA AAGATAAACT GA
 
Protein sequence
MSHEKRGLEF YLLALFFIIF VLFLYGPLSA ILILSFQGPD GGLTFPMNGI STHWFFNLFE 
KQAVGDFGAS FRRSFTLGLM VMAVTVVVSL LAGLAFRRRF RGSTALFYAT VASLVVPSII
ISLGIGVVFQ EGGLKPAWYS SAFGAHLTWT LPFGVLIMFA VFNRFSPAYE EAARDLGASS
WQTFRHVVLP MIAPSLIGVG LFGFTLSYDE FARTLMTSGT YNTLPLEIYG MTTNVTTPVL
YALGTVTTLF SFTIILIALG IMTMLSRRQA KIN