Gene Rleg_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2872 
Symbol 
ID8013809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2865006 
End bp2866433 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content65% 
IMG OID644825442 
Productbeta-lactamase 
Protein accessionYP_002976671 
Protein GI241205575 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTG TCCTGCGTAT CCTGAAGGCG CTTGCTCTCC TTCTCGTAGT CATCATCGTC 
GCCGCGGCCG GCTGGCTCTT CATCCGGCCA CCGCAACTGC TGCGCGTCGG CGACGGTTAT
GCCGCCAAGA TCGTCTGCTC CAACGTGTTC ATCGCCGGCC GGGAGGCGGA GGATGTGCTC
CATGACGACG TCCAGGCGCC TGGAAATCCG CTACTGCGGC TGGTGCGCGT CAGCGTCGAC
CCCGACAACG ACCGCGTGAC GGCGCGCTTC ATGGGACTGT TTGCGCCGAG TTATGCGCTC
TATCGCGGCG CTTTCGGCTG CACGAGCGTC CCGGACGGCA ATTTCGAGGC GGCTGCGAAG
GCAGCGCCCT TCGATCCGCC GGCCAAAATG CAGGCGAATG ACGCCTTGTG GCCGGAGGGC
GAGGGGACCG GCAATCCGGC GGACGGGAAG ATCGCCGCGC TGCTTGCCGA TGCCGGAATT
GCCGGCCCGG CAATGCGGGC GATCGTGGTG GTGCGCAATG GTCGCATCGT CGCTGAGGCC
TATGGCCCCG GCTTCTCGGC GAAGACGCCG CTAATCGGCT GGTCGATGAC GAAGACCGTG
AATGCGGCGG TCCTCGGCCG GCTGATGCTT GGCGGCAAGG TCTCCTTCGA CGATGATAGC
CTGTTGGCGC AGTGGAAGAA CGATGCGCGC GCCAGAATCA AGGTTTCCGA TCTGCTCGGC
ATGGAGAGCG GCCTTGCCTT TAACGAAGAC TATGGCGACG TCGCCGATGT CACGCGCATG
CTCTATCTCG ATCCCGACAT GGTATCGCTG CCGGCCAATG CACCGATGGA GGCAGCGCCC
GGCCAACGCT TCCGCTATTC GAGCGGCACG GCCGTGCTGC TCTCGCGCAT CTGGATGGAC
AGGGTCGGCA ATGCTCAGGC GGCTTTTTCC TATCCGCACG ACGCGTTGTT TGCCCCGCTC
GGCATGACGA GCGCCGTATT CGAACTCGAT GCGCGCGGCA CGTTCGCCGG AAGCTCCTAT
CTTTATGCGA CGGCGCATGA CTGGGCGCGC TTTGGGCAGT TCCTGCTGCA AGACGGCGTG
TGGAACGGAC AGCGACTGTT GCCGGAGGGT TTTGTCGGCG CCATGCGCAC CCCGACGGCG
GCTTCGAACG GGCGGTATAC GCAGGGCCAG GCCTGGCTCG CACCCGGTCG CGGCTCGAGC
GCTGAGGCCG GGCTGCCTGA GGATACGTTC TGGTTGACGG GCCATGACGG GCAGAGCATG
GCGATCGTGC CTTCCGCCAA TCTGGTGGTC GTCAGGCTTG GCCTGACGCC GAGCAGGCTC
GACTATCAGC CGCAGACGCT GCTGAAGGCG ATCCTGGCGG CATTGCCACA ACCGGGAGAG
CAGCAACAAC AGGCCGGATC GCAACAACAG ACCCAGCCGC AGCCATAG
 
Protein sequence
MRFVLRILKA LALLLVVIIV AAAGWLFIRP PQLLRVGDGY AAKIVCSNVF IAGREAEDVL 
HDDVQAPGNP LLRLVRVSVD PDNDRVTARF MGLFAPSYAL YRGAFGCTSV PDGNFEAAAK
AAPFDPPAKM QANDALWPEG EGTGNPADGK IAALLADAGI AGPAMRAIVV VRNGRIVAEA
YGPGFSAKTP LIGWSMTKTV NAAVLGRLML GGKVSFDDDS LLAQWKNDAR ARIKVSDLLG
MESGLAFNED YGDVADVTRM LYLDPDMVSL PANAPMEAAP GQRFRYSSGT AVLLSRIWMD
RVGNAQAAFS YPHDALFAPL GMTSAVFELD ARGTFAGSSY LYATAHDWAR FGQFLLQDGV
WNGQRLLPEG FVGAMRTPTA ASNGRYTQGQ AWLAPGRGSS AEAGLPEDTF WLTGHDGQSM
AIVPSANLVV VRLGLTPSRL DYQPQTLLKA ILAALPQPGE QQQQAGSQQQ TQPQP