| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2858 |
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| Symbol | |
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| ID | 8013794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 2849011 |
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| End bp | 2850444 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644825428 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002976657 |
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| Protein GI | 241205561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.769663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00311038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAGCTGGC TCTGGACGAC GGAAGACATG ATCGCAGCGA TGGCGGGACG CCCTTTCGGC
ACGCTGCCCG AAGGCATCAC CGGCATTTCC ATCGACAGCC GCTCGACTAC TCCAGGCGCA
GCCTTCTTCG CGATCAAGGG TGACCGCGTC GACGGTCACG ACTACGCCTC GATGGCGATG
GCGAACGGCG CTTCCCTTCT CGTCGTCAGC GAGGCGAGAC TTCCCGCCAT GGGTCGCCTG
ACGGTGCCGA TGATCGTCGT GGAAGATGTG CTGGCGGCAC TTGGCAGGCT CGGCCTTGCC
TCGCGCGAGC GCTCTAAGGC CCGGATCATC GCAGTGACCG GATCGGTCGG CAAGACGACC
ACGAAGGAAA TGCTGCGGCA TGTGCTGGCT CCCTCCGGCA AGGTGCACGC CTCCGTCGCC
TCCTTCAACA ATCACTGGGG CGTGCCGCTG ACGCTGGCGC GCATGCCTGA GGATACGGAT
TACGGCGTCT TCGAAGTCGG AATGAACCAT CCCGGCGAGG TTCGGCCGCT GGTGGCGATG
ATCCGTCCCG ATGTCGCCAT CATCACGACG ATCGCGCCAG CGCATCTCGG CAATTTCAAG
AACATCAAGG AAATCGCCGC CGCCAAGGCC GAGATCTTCG AGGGGCTCGA ACCCGGCGGC
CATGTCGTGC TCAACCGCGA CAACGACCAG TTCAATTTCC TCGACCGCAC GGCGCAATCG
CTCGGCATCG AGCATATCCA TTCCTTCGGC CAGCATGCCA AGGCTGAATT CCGGCTCGCA
GAATTCAATG GTTCCGACGA GAATTCGACG CTGTGGCTGA CGATCGGCGG CGAGACGCTG
GAAGTTGCGC TCGGCGCGCC GGGCCGCCAT ATCGCCGAGA ATGCGCTCGC AGCGCTCGGC
GTCGTCAGGA TCGTCGGCGC CGATATGCAG AAGGCGATCG AAGCGCTTGC GACGCTGAAG
CCGGAAAAGG GCAGGGGCAA GCGCCACCGG CTTTCGATCG GCGGCGGCAG CTTCACGCTG
ATCGACGAGA GCTACAATGC CAATCCGGCC TCGATGCGCG CGGCGATCGC GCTGCTGGCG
GCCTCCGAGC CGACCGGCCG CGGACGCCGT ATCGCCGTGC TCGGCGACAT GCTGGAAATG
GGCGACTATG CGCAGAAGGT CCATACCGAC CTTGCCGTGC CGCTGCTTGC TGCCGGTATC
GAACATGTCT GGTTGGCCGG AGCGGAGATG GCTGCGCTCA AGGAATCGTT GCCGGAAAGC
GTCCATGTCG AATATCGCGA GAACACGAGC GAATTGACGG ACTATGTATT GAACTCGGTC
GCGCCAGGCG ACGTGTTGAT GGTGAAATCG TCTCTGGGCA TCGGTTTCGG CAAGATCGTC
GCCGCGCTCC TTGACAAGTT CCCGCCATTT GCCGACACGC AACGCGAATT TTGA
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| Protein sequence | MSWLWTTEDM IAAMAGRPFG TLPEGITGIS IDSRSTTPGA AFFAIKGDRV DGHDYASMAM
ANGASLLVVS EARLPAMGRL TVPMIVVEDV LAALGRLGLA SRERSKARII AVTGSVGKTT
TKEMLRHVLA PSGKVHASVA SFNNHWGVPL TLARMPEDTD YGVFEVGMNH PGEVRPLVAM
IRPDVAIITT IAPAHLGNFK NIKEIAAAKA EIFEGLEPGG HVVLNRDNDQ FNFLDRTAQS
LGIEHIHSFG QHAKAEFRLA EFNGSDENST LWLTIGGETL EVALGAPGRH IAENALAALG
VVRIVGADMQ KAIEALATLK PEKGRGKRHR LSIGGGSFTL IDESYNANPA SMRAAIALLA
ASEPTGRGRR IAVLGDMLEM GDYAQKVHTD LAVPLLAAGI EHVWLAGAEM AALKESLPES
VHVEYRENTS ELTDYVLNSV APGDVLMVKS SLGIGFGKIV AALLDKFPPF ADTQREF
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