| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2848 |
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| Symbol | ddl |
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| ID | 8013785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 2837281 |
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| End bp | 2838207 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644825418 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_002976647 |
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| Protein GI | 241205551 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.67822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0145718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCGCA AGCATGTCGC TGTCCTGATG GGCGGATTTT CCTCGGAAAG GCCTGTCAGC
CTTTCCTCGG GAAAGGCTTG CGCAGAAGCC CTCGAGGCAG AGGGCTTCGA CGTGACGCGT
ATCGACGTGG CGCGCGACGT TTCCGAGAAG CTTGCTGCGC TGAAGCCCGA TGTCGTCTTC
AATGCGCTTC ACGGCCCGTT CGGCGAGGAC GGCACCATTC AGGGCATCCT CGAATATCTT
GAAATCCCCT ATACGCATTC GGGCGTGCTT GCCTCGGCGC TGGCGATGGA CAAGGACAAG
GCGAAGCTCG TTGCCGGCGC CGCCGGCATT CCGGTGGCCG AATCGCAGGT GGTCAACCGT
TTCGCCTTTC CCGCGACGCA TCCGATGAAG CCGCCCTATG TGGTGAAACC CGTCCGCGAA
GGGTCGAGCT TCGGCGTCGT CATCGTCACC GAAGATCAGG CGCATCCGCC ACAGATCGTC
AGCTCGCCCG AATGGCGCTA CGGCGAAGAG GTGATCGTCG AGCGCTATGT TTACGGTCGC
GAACTCACCT GCGGTGTCAT GGGTGAAACT CCGCTCGGTG TCACGGAAGT GGTGCCGCAG
GGACACAATT TTTATGATTA CGACTCCAAG TACGCGGCAG GCGGTTCAAA ACACGTCATC
CCCGCGAAAA TTTCACCGAA TATTTACCAA AAAATACAAA CATTGTCCCT AAGGGCGCAT
CAGGCAATCG GTTGTCGCGG CGTCAGTCGG TCCGACTTTC GTTACGACGA TCGTTTCTCC
GAAGACGGCG AAATCATCTG GCTGGAAGTC AATACCCAGC CAGGTATGAC CCCAACCTCG
CTCGTGCCCG AAATGGCCGG TCATGCCGGC TATTCGTTTG GTCAGTTTCT CCGGTGGATG
GTGGAGGACG CGTCTTGTTT GCGTTGA
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| Protein sequence | MSRKHVAVLM GGFSSERPVS LSSGKACAEA LEAEGFDVTR IDVARDVSEK LAALKPDVVF
NALHGPFGED GTIQGILEYL EIPYTHSGVL ASALAMDKDK AKLVAGAAGI PVAESQVVNR
FAFPATHPMK PPYVVKPVRE GSSFGVVIVT EDQAHPPQIV SSPEWRYGEE VIVERYVYGR
ELTCGVMGET PLGVTEVVPQ GHNFYDYDSK YAAGGSKHVI PAKISPNIYQ KIQTLSLRAH
QAIGCRGVSR SDFRYDDRFS EDGEIIWLEV NTQPGMTPTS LVPEMAGHAG YSFGQFLRWM
VEDASCLR
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