| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2840 |
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| Symbol | ligA |
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| ID | 8013778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 2826142 |
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| End bp | 2828298 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644825410 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_002976639 |
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| Protein GI | 241205543 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.229062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0102416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG AAAGTTCCGC CGTCGATACG TTGACGATCG AAGAGGCTGC CGCCGAGCTC
GAACGGCTGG CAAAGGAGAT CGCACATCAC GATGCGCTCT ATCACGGCAA GGACCGGCCG
GAGATTTCGG ATGCCGATTA CGACGCGCTG AAGCGCCGCA ACGATGCGCT GGAAGTGCGC
TTTCCCGAGT TGATCCGCGA AGACAGCCCA TCGCGGCATG TCGGTGCGGC GCCCTCCGTC
ACTTTTTCGC CTGTCGTCCA CGCGCGGCCG ATGTTGTCGC TCGACAACAC CTTCTCGCAG
GAGGACGTGC AGGATTTTGT CGCCGGCGTC TATCGTTTCC TCGGCCGGCT GCCGGACCAG
TCGATCGCCT TTACCGCCGA GCCGAAGATC GACGGTCTCT CGATGTCGAT CCGTTATGAA
AACGGCAGGC TGGTGACCGC TGCAACGCGT GGCGACGGCA CGACGGGGGA GAACGTCACT
GCCAACATCC GGACCATCGC CGAGATCCCC AACGAGCTGC CGAAAGGCGT GCCCGCTGTC
GTCGAGATCC GCGGTGAGGT CTACATGGCC AAGAGCGACT TCCTGGCGCT GAACCGGCAG
ATGGAGGCGG AGGGTAAGCA GACCTATGTC AATCCGCGCA ATACGGCTGC CGGATCGCTG
CGCCAGCTCG ACGCCAAGGT GACGGCGAGC CGCAAGCTGA AATTCTTCGC CTACGCCTGG
GGCGAGATGT CGGAAATGCC GGCCGATACG CAATTTGGGA TGGTGCAGAC CTTCAAGGAC
TGGGGTTTTC CGGTCAATCC GCTGGTGAAA CGATTGAACT CGGTCGCCGA CATCCTGACG
CATTATGACG AGATCGGCCT TGAGCGCCCG GATCTCGACT ACGACATCGA CGGCGTCGTC
TATAAGGTCG ACAGTCTCGA GTTGCAGGCC CGTCTCGGTT TCCGCTCGCG TTCACCACGC
TGGGCGACGG CGCACAAGTT CCCTGCCGAA CAGGCTTTCA CTATCGTCGA GAATATCGAC
ATTCAAGTCG GCCGCACCGG CGCCTTGACC CCTGTCGCGC GATTGACGCC GATCACCGTC
GGTGGCGTGG TCGTCACCAA TGCGACGCTA CACAATGCGG ATTACATCAG GGGCATCGGC
AATAGCGGCG AGCGCATCCG CGCCGACGAG CACGATATCC GCATTGGCGA TACCGTCATT
GTGCAGCGCG CCGGCGATGT GATTCCGCAG GTGCTTGACG TCGTCATGGA GAAGCGCTCG
GCCGAGGCCA GGCCCTATGA ATTTCCGAAG ACCTGCCCGG TCTGCGGGTC GCATGCCGTG
CGTGAAAGAC ATGAGAAGAC CGGCAAGCTC GATTCGGTCA CCCGCTGCAC CGGCGGCTTC
ATCTGCAGGG CGCAGGCGAC GGAGCATTTG AAGCACTTCG TTTCGCGCAA CGCTTTCGAT
ATTGAAGGGC TCGGCTCGAA GCAGATCGAC TTCTTTTTCG AAAACGAGGA CGCGTCGCTG
CAGATCCGCA CTGCGCCCGA TATCTTCACG CTGGAGAAGC GTCAGCAGCA ATCGCTGACC
AAGCTAGAGA ATATCGACGG CTTCGGCAAG GTCAGCGTCG GCAAGCTCTA TGCGGCGATC
ACCGAACGGC GCAGCATTGC GCTCCACCGC TTCATCTACG CGCTCGGCAT CCGTCATGTC
GGCGAGACCA CAGCGAAGCT CTTGGCGCGC TCCTACGGCA CCTATGCGGC CTTTGAAACC
GCAATGCGCG AGGCCGAGGC GCTTTCCGGT GACGCCTGGA ATGATCTCAA CGCCATCGAG
GGTATCGGCG AGGTCGTGGC GCGGGCCATC GTCGAATTCT ACAAGGAGCC GCGCAATGTC
GAGGTGATCA CCCGGCTTAT TGAGGAAGTG ACGCCCGAGG AGGCCGAACA ACCGAAGACG
GCAGGCAGCC CGGTCGCCGG CAAGACCGTG GTTTTCACCG GCTCGCTTGA AAAGTTCACC
CGCGACGAGG CGAAGGCGAG GGCGGAAAGT CTCGGCGCCA AGGTGGCGGG ATCAGTCTCC
AAGAAGACCG ACATCGTCGT CGCCGGCCCC GGCGCCGGCT CCAAGCTCGA CAAGGCGCGT
GAGTTCGGCG TGCAGACGAT GGACGAGGAC GAGTGGCTGG CGCTGATCAG CGGGTGA
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| Protein sequence | MSTESSAVDT LTIEEAAAEL ERLAKEIAHH DALYHGKDRP EISDADYDAL KRRNDALEVR
FPELIREDSP SRHVGAAPSV TFSPVVHARP MLSLDNTFSQ EDVQDFVAGV YRFLGRLPDQ
SIAFTAEPKI DGLSMSIRYE NGRLVTAATR GDGTTGENVT ANIRTIAEIP NELPKGVPAV
VEIRGEVYMA KSDFLALNRQ MEAEGKQTYV NPRNTAAGSL RQLDAKVTAS RKLKFFAYAW
GEMSEMPADT QFGMVQTFKD WGFPVNPLVK RLNSVADILT HYDEIGLERP DLDYDIDGVV
YKVDSLELQA RLGFRSRSPR WATAHKFPAE QAFTIVENID IQVGRTGALT PVARLTPITV
GGVVVTNATL HNADYIRGIG NSGERIRADE HDIRIGDTVI VQRAGDVIPQ VLDVVMEKRS
AEARPYEFPK TCPVCGSHAV RERHEKTGKL DSVTRCTGGF ICRAQATEHL KHFVSRNAFD
IEGLGSKQID FFFENEDASL QIRTAPDIFT LEKRQQQSLT KLENIDGFGK VSVGKLYAAI
TERRSIALHR FIYALGIRHV GETTAKLLAR SYGTYAAFET AMREAEALSG DAWNDLNAIE
GIGEVVARAI VEFYKEPRNV EVITRLIEEV TPEEAEQPKT AGSPVAGKTV VFTGSLEKFT
RDEAKARAES LGAKVAGSVS KKTDIVVAGP GAGSKLDKAR EFGVQTMDED EWLALISG
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