| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2825 |
|---|
| Symbol | |
|---|
| ID | 8013764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 2814133 |
|---|
| End bp | 2814759 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644825396 |
|---|
| Product | Nicotinamidase |
|---|
| Protein accession | YP_002976625 |
|---|
| Protein GI | 241205529 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.538544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.188914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGC TGCTGCTCGT CGATATTCAG AACGGCTTCT GTCCGGGCGG CAATCTGCCG
GTGCCGGAGG GCGACAAGGT GGTTCCCGTC GCAAACAGAC TGATCGACAG CGGCAAATAC
GATCTGATCG TCGCCTCGCA GGACTGGCAT CCGCCGGGCC ACGGCAGCTT CGCCTCCGCC
CATCCCGGTG CCGCCCCCTT CGAGATGGGA GAACTGTCGG GCAAGCCGCA GATGATGTGG
CCCGACCACT GCATGCAGGG TACGCTCGAT GCCGAACTGC ACCCCGAGCT CAAATCCGAA
GAGATCGACC TGATTCAGCA GAAGGGCGAG GATCCTGATA TCGACAGCTA TTCGGCCTTC
CGCGACAATG ACCGCGATGC CTCGACCGGC CTTTCCGATT TCCTTGAGGA TCAGGGCGTC
ACCGACCTCG ACGTCTGCGG GCTGGCGACC GACTATTGCG TCAAGTTCTC CGCGCTCGAC
GCGCTGGAGA TGATGCCGGG TGTCCGCGTC CGCTTCATCG AGGATGCAAG CCGCGGCATC
ACGCCCGAAG GCGTCGCCGC CGCCATCGAG GAGATGCGGG CGCATGGCAT CGCGATCGTC
GACAGCACCA AGATCCTGGC CGGCTAG
|
|---|
| Protein sequence | MKALLLVDIQ NGFCPGGNLP VPEGDKVVPV ANRLIDSGKY DLIVASQDWH PPGHGSFASA
HPGAAPFEMG ELSGKPQMMW PDHCMQGTLD AELHPELKSE EIDLIQQKGE DPDIDSYSAF
RDNDRDASTG LSDFLEDQGV TDLDVCGLAT DYCVKFSALD ALEMMPGVRV RFIEDASRGI
TPEGVAAAIE EMRAHGIAIV DSTKILAG
|
|---|
| |