Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2643 |
Symbol | |
ID | 8015708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2632867 |
End bp | 2635224 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644825218 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_002976448 |
Protein GI | 241205352 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCAGA GTTCGTCGAA GAGACCGGCA AGATTAGGCT CATTTCGGGC AAAGTTCATC TTGGTCGTCG GTGGAGCTGT CCTCTTTGAT CTGCTGGTCA GCGGTGGACT GGCGCTTTGG AATGTTCAGA GGCTGTCGCG CGACGCCACG CTCGAAGTCG GACAGGGTCT TGAAGCAGCA AGCCAGGAAT ACATCCGCAC ATACGCCGAT TCCACCGCAG CACAGGTGAG TTTGCTCCTG CGGCAGGTTC ACAACGACGT CAGCACCTTG GCGGGTGTAC TCCAGGCGCA GATCGACGAT CCCGAGCGTA ATTCCGATGT CGGCGCGGCG ATCGCCCGCA CGTCTCCCGG CAGCGTCAGC CTGTCCTACG ATCAAAAGGC GAACTGGTCT CAGAACGCTC CGGGCTCAGT CTCAGTTGTC AGCGTCTGGA GTTACTTGCT CGGAGAAGAC CACAACCCGA GACCCGACGT TCAGACCGAT ATCCAGACCA GCGCGGTTCT GGACCTTGTC GCACCGAGCT TGCTGCAGCA CGGGGCCTCA AAGCTGCAGA TGTATTACAT CGGATCGAAA GAACGACCAA TCTTCAGAAC GGCGCCTTAT ACCGACCAGG CTCAGACCTT CGACCGCCTT TATCCTGGTC ATAACGAGGC CAATTTCTGG GACTTCTTTT TTCCCGGACT TTATGAGTCC TGGCAGGGCT GGGCCAAGGA TATGAAAACG CGACCGGTCG CGGACGATAT AACCCAGACA GCGCCCTATA CGGACGCCAT TACCGGGAAA CTGATCGTTT CTTTCTTTCA ACCACTATGG ACAGCCGACA GGAAGAATGT CGCCGGGACG GCTGGCGCGG ACATCACACT CGACCAGCTC GCGCAGACTG TTGAAAATGT GAAAGTGGCT CAGTCCGGCT TTGGATTTCT CGCAATGTCC GACGGAAACG TTGTGGCGAT CAACAGCACA GGCGAAAAAA CGCTCGGTCT GCGTTCTGCG AGCGATGCGA GCGGAAGCGG AGTGACCGGA CTGGAGCGCT CCCTGAAGGG AAGCTCCCAG CCTGCGATTG CAAAACTGGC CCTTGATCGC GAACTGGGCA TCCAACATTT GTTGTTGCGG CAGGAGGGTA ACGAGGTCCC CTATATCGTT ATCGTCAAGA AACTCCCCGC GACCAATCTT TGGTCCAGCG GCCCGGTTCG GCAAGAGGCG ATGTCTCTTG GAGTGGTTGT GCCTGAACGA GAAATCCAGG CCTCCCTTTA TGCGGCCCAA GCCAAAATTT CGGAAGCTAC CAACCGGATC GTGATCTACC AAATCCTGGC GATCCTAATG TCACTGCTTG TTGTGGCTAT AGCAGTAATT GCGGCTTCGA AACGAATAAC GAGCGGAATT AGTGCACTTG CAGATGCCGC CAAACGGATT CAGGCGAAGG ATTATTCGGT CAGGGTGGCC ATAACAAGCA AAGATGAGGT CGGCGAGGCT GGTGAAGCAT TCAACCGGAT GGCCGAACAG ATCAGCTATC ACACGGAAAA TCTCGAGCAG CTTGTCGAAG AGCGAACAGC TCAAATCGAA GATGCAAAGG AAGAGATTTC GACGCTGAAC GCACAGCTCC AGCGAGAAAA TAGACGTCTC GGAACAGAGC TGGCCGTCGC CGAGAGGATC CAGCTCATGG TTCTTCCGCT GCACCAGGAG CTTGAGGAGT TTCAGGCCCT TGAGATCGCA GCCTATATGA GACCTGCAGA AGAAGTCGGC GGCGATTATT ACGACGTATT GAAGAGCGGA AATCGGTTGA AGATTGGCAT CGGCGACGTC ACCGGACACG GGCTCGAAAG CGGCGTGCTG ATGTTGATGG TTCAGTCCGT CGCCCGCGCC CTGCAGGAAG CAGGAAACAC CGATGCCGTC AAATTTCTCA CAGACCTGAA CAGCGCCCTG TTCAAAAACA TAGTGAGAAC CAAAATCGAC AAGCATCTCA CTCTGGCGTT TCTTGACTAT GACGGCAAAG AGATGATCCT GTCGGGACAA CACGAGGAAG TTGTCGTCGT GCGGGCGAAC GGCGAGGTCG AGCGCATAGA CACCATGGAT CTGGGTATAC CGATCGGGCT GGAAGCCGAT ATTTCTGCCT TTATTAAAAC CCGCGAAATA ACCTTCGAGA CGGGCGACCT CATACTCCTG CATACGGACG GCGTAACAGA AGCCGAAAAC GACGCTGGAG AACTCTTTGG CATAGAACGT CTGTGCCGCG AAGCACTGCG CTTGAAGGAC CAGAGCGCTG AGAAAGTCGT TGCCGGAATT ATAGCGACAT TAATGCTCTT CATTGGATCG CAGAAGATTT ACGACGACAT CACGCTTCTC GCAGTGCGAC ATAGGTGA
|
Protein sequence | MDQSSSKRPA RLGSFRAKFI LVVGGAVLFD LLVSGGLALW NVQRLSRDAT LEVGQGLEAA SQEYIRTYAD STAAQVSLLL RQVHNDVSTL AGVLQAQIDD PERNSDVGAA IARTSPGSVS LSYDQKANWS QNAPGSVSVV SVWSYLLGED HNPRPDVQTD IQTSAVLDLV APSLLQHGAS KLQMYYIGSK ERPIFRTAPY TDQAQTFDRL YPGHNEANFW DFFFPGLYES WQGWAKDMKT RPVADDITQT APYTDAITGK LIVSFFQPLW TADRKNVAGT AGADITLDQL AQTVENVKVA QSGFGFLAMS DGNVVAINST GEKTLGLRSA SDASGSGVTG LERSLKGSSQ PAIAKLALDR ELGIQHLLLR QEGNEVPYIV IVKKLPATNL WSSGPVRQEA MSLGVVVPER EIQASLYAAQ AKISEATNRI VIYQILAILM SLLVVAIAVI AASKRITSGI SALADAAKRI QAKDYSVRVA ITSKDEVGEA GEAFNRMAEQ ISYHTENLEQ LVEERTAQIE DAKEEISTLN AQLQRENRRL GTELAVAERI QLMVLPLHQE LEEFQALEIA AYMRPAEEVG GDYYDVLKSG NRLKIGIGDV TGHGLESGVL MLMVQSVARA LQEAGNTDAV KFLTDLNSAL FKNIVRTKID KHLTLAFLDY DGKEMILSGQ HEEVVVVRAN GEVERIDTMD LGIPIGLEAD ISAFIKTREI TFETGDLILL HTDGVTEAEN DAGELFGIER LCREALRLKD QSAEKVVAGI IATLMLFIGS QKIYDDITLL AVRHR
|
| |