Gene Rleg_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2643 
Symbol 
ID8015708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2632867 
End bp2635224 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content55% 
IMG OID644825218 
Productprotein serine/threonine phosphatase 
Protein accessionYP_002976448 
Protein GI241205352 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGA GTTCGTCGAA GAGACCGGCA AGATTAGGCT CATTTCGGGC AAAGTTCATC 
TTGGTCGTCG GTGGAGCTGT CCTCTTTGAT CTGCTGGTCA GCGGTGGACT GGCGCTTTGG
AATGTTCAGA GGCTGTCGCG CGACGCCACG CTCGAAGTCG GACAGGGTCT TGAAGCAGCA
AGCCAGGAAT ACATCCGCAC ATACGCCGAT TCCACCGCAG CACAGGTGAG TTTGCTCCTG
CGGCAGGTTC ACAACGACGT CAGCACCTTG GCGGGTGTAC TCCAGGCGCA GATCGACGAT
CCCGAGCGTA ATTCCGATGT CGGCGCGGCG ATCGCCCGCA CGTCTCCCGG CAGCGTCAGC
CTGTCCTACG ATCAAAAGGC GAACTGGTCT CAGAACGCTC CGGGCTCAGT CTCAGTTGTC
AGCGTCTGGA GTTACTTGCT CGGAGAAGAC CACAACCCGA GACCCGACGT TCAGACCGAT
ATCCAGACCA GCGCGGTTCT GGACCTTGTC GCACCGAGCT TGCTGCAGCA CGGGGCCTCA
AAGCTGCAGA TGTATTACAT CGGATCGAAA GAACGACCAA TCTTCAGAAC GGCGCCTTAT
ACCGACCAGG CTCAGACCTT CGACCGCCTT TATCCTGGTC ATAACGAGGC CAATTTCTGG
GACTTCTTTT TTCCCGGACT TTATGAGTCC TGGCAGGGCT GGGCCAAGGA TATGAAAACG
CGACCGGTCG CGGACGATAT AACCCAGACA GCGCCCTATA CGGACGCCAT TACCGGGAAA
CTGATCGTTT CTTTCTTTCA ACCACTATGG ACAGCCGACA GGAAGAATGT CGCCGGGACG
GCTGGCGCGG ACATCACACT CGACCAGCTC GCGCAGACTG TTGAAAATGT GAAAGTGGCT
CAGTCCGGCT TTGGATTTCT CGCAATGTCC GACGGAAACG TTGTGGCGAT CAACAGCACA
GGCGAAAAAA CGCTCGGTCT GCGTTCTGCG AGCGATGCGA GCGGAAGCGG AGTGACCGGA
CTGGAGCGCT CCCTGAAGGG AAGCTCCCAG CCTGCGATTG CAAAACTGGC CCTTGATCGC
GAACTGGGCA TCCAACATTT GTTGTTGCGG CAGGAGGGTA ACGAGGTCCC CTATATCGTT
ATCGTCAAGA AACTCCCCGC GACCAATCTT TGGTCCAGCG GCCCGGTTCG GCAAGAGGCG
ATGTCTCTTG GAGTGGTTGT GCCTGAACGA GAAATCCAGG CCTCCCTTTA TGCGGCCCAA
GCCAAAATTT CGGAAGCTAC CAACCGGATC GTGATCTACC AAATCCTGGC GATCCTAATG
TCACTGCTTG TTGTGGCTAT AGCAGTAATT GCGGCTTCGA AACGAATAAC GAGCGGAATT
AGTGCACTTG CAGATGCCGC CAAACGGATT CAGGCGAAGG ATTATTCGGT CAGGGTGGCC
ATAACAAGCA AAGATGAGGT CGGCGAGGCT GGTGAAGCAT TCAACCGGAT GGCCGAACAG
ATCAGCTATC ACACGGAAAA TCTCGAGCAG CTTGTCGAAG AGCGAACAGC TCAAATCGAA
GATGCAAAGG AAGAGATTTC GACGCTGAAC GCACAGCTCC AGCGAGAAAA TAGACGTCTC
GGAACAGAGC TGGCCGTCGC CGAGAGGATC CAGCTCATGG TTCTTCCGCT GCACCAGGAG
CTTGAGGAGT TTCAGGCCCT TGAGATCGCA GCCTATATGA GACCTGCAGA AGAAGTCGGC
GGCGATTATT ACGACGTATT GAAGAGCGGA AATCGGTTGA AGATTGGCAT CGGCGACGTC
ACCGGACACG GGCTCGAAAG CGGCGTGCTG ATGTTGATGG TTCAGTCCGT CGCCCGCGCC
CTGCAGGAAG CAGGAAACAC CGATGCCGTC AAATTTCTCA CAGACCTGAA CAGCGCCCTG
TTCAAAAACA TAGTGAGAAC CAAAATCGAC AAGCATCTCA CTCTGGCGTT TCTTGACTAT
GACGGCAAAG AGATGATCCT GTCGGGACAA CACGAGGAAG TTGTCGTCGT GCGGGCGAAC
GGCGAGGTCG AGCGCATAGA CACCATGGAT CTGGGTATAC CGATCGGGCT GGAAGCCGAT
ATTTCTGCCT TTATTAAAAC CCGCGAAATA ACCTTCGAGA CGGGCGACCT CATACTCCTG
CATACGGACG GCGTAACAGA AGCCGAAAAC GACGCTGGAG AACTCTTTGG CATAGAACGT
CTGTGCCGCG AAGCACTGCG CTTGAAGGAC CAGAGCGCTG AGAAAGTCGT TGCCGGAATT
ATAGCGACAT TAATGCTCTT CATTGGATCG CAGAAGATTT ACGACGACAT CACGCTTCTC
GCAGTGCGAC ATAGGTGA
 
Protein sequence
MDQSSSKRPA RLGSFRAKFI LVVGGAVLFD LLVSGGLALW NVQRLSRDAT LEVGQGLEAA 
SQEYIRTYAD STAAQVSLLL RQVHNDVSTL AGVLQAQIDD PERNSDVGAA IARTSPGSVS
LSYDQKANWS QNAPGSVSVV SVWSYLLGED HNPRPDVQTD IQTSAVLDLV APSLLQHGAS
KLQMYYIGSK ERPIFRTAPY TDQAQTFDRL YPGHNEANFW DFFFPGLYES WQGWAKDMKT
RPVADDITQT APYTDAITGK LIVSFFQPLW TADRKNVAGT AGADITLDQL AQTVENVKVA
QSGFGFLAMS DGNVVAINST GEKTLGLRSA SDASGSGVTG LERSLKGSSQ PAIAKLALDR
ELGIQHLLLR QEGNEVPYIV IVKKLPATNL WSSGPVRQEA MSLGVVVPER EIQASLYAAQ
AKISEATNRI VIYQILAILM SLLVVAIAVI AASKRITSGI SALADAAKRI QAKDYSVRVA
ITSKDEVGEA GEAFNRMAEQ ISYHTENLEQ LVEERTAQIE DAKEEISTLN AQLQRENRRL
GTELAVAERI QLMVLPLHQE LEEFQALEIA AYMRPAEEVG GDYYDVLKSG NRLKIGIGDV
TGHGLESGVL MLMVQSVARA LQEAGNTDAV KFLTDLNSAL FKNIVRTKID KHLTLAFLDY
DGKEMILSGQ HEEVVVVRAN GEVERIDTMD LGIPIGLEAD ISAFIKTREI TFETGDLILL
HTDGVTEAEN DAGELFGIER LCREALRLKD QSAEKVVAGI IATLMLFIGS QKIYDDITLL
AVRHR