Gene Rleg_2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2566 
Symbol 
ID8013532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2564336 
End bp2565916 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content65% 
IMG OID644825143 
ProductNa+/H+ antiporter 
Protein accessionYP_002976373 
Protein GI241205277 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form
[TIGR01168] Gram-positive signal peptide, YSIRK family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCAA CACACTTGTT CGAGCTCGTC ATCGCGATGT TTCTTGCGAT CATCGCGCTG 
CATTATGCCG CCCACCGGCT CGGACTGCCG CCGTCCGTCG CGCTGCTGAC CGGCGGCGCC
TTGCTGGCGT TTGTGCCGGG GTTGCCGGCG ATATCAGTCG ATCCGGAGCT GGTGCTCGTC
ATCTTCCTGC CGCCGCTCCT CATGGACGGC GCTTGGGCCA TCGCGCTGGC GCGGTTGCGG
CGCCATATGA TCGGCATCGC CTCGCTGGCC GTCGGCGCGG TGTTGTTCAC CTGTGCGGTG
GTGGCCGTCG TGGCCCATCT TATCTTTCCG TCGCTTCCCT GGGCCGCCTG CGCGGCCCTT
GGCGCGATCG TTGCACCGCC GGACGCGGTC TCGGCGCGCG CCGTGCTCGA GCGCGTCAGG
CTGCCGCGGC GGCTGCAGAT TCTATTGGAA GGCGAGAGCC TGCTCAACGA TGCGAGCGGC
CTGGTTCTTT TCCGTTTTGC CGTTGCCGCC GTCGCAACCG GAGCCTTCAG CGCGGGGGAG
GCGGTCGGCA GCTTCTTCGT GCTGGCGCTC GGCGGCGCCG TCGTCGGCGT CGTTGTGGGG
ACGGCATGGG TCAAGCTCGC CCGGCGTCTC GGCGACGAAT ATCTGATCAT CGCAGCCACG
GTGCTGCTTG CCTGGATTTC CTATCTGCTC GGAGAGTTGC TGCATGTTTC CGGCGTCATC
GCCACCGTCA CCACCGGCCT GATCGCGTCC TGGCACCAGC ACACCGTATT TTCGGCCGCA
ACGCGCATGC GCGGCACGTC GTTCTGGACC GTGATGATCT TCCTGATGGA GGCTTCAGTC
TTCACGTTGA TCGGGTTGTC GCTGCGGGAT GTCGTCGAAC GCGGCGGCGG CTTAACCACC
GTGATCGCGA CGATGGGACT AGCGATGCTG GCGATCCTCC TCACGCTGGT GGTGGCGCGG
TTTGCCTGGG TTTTCGCCTC CGATCTCATC ATCAAGTTCT GTGCGGCCCT GGGGGTGACG
CGAGCTCAGC CGCTCGGCGT CGGCGGCGCG ACGGTTCTCA GCTGGGCAGG TGTGCGCGGC
GTGATCACGC TCGCCCTGGC GCTCAGCCTG CCCGAGGGGT TCCCGGGCCG TGACTTCATC
CTTGCCACAT CCTTCGCCGT CATTCTCGGA ACCGTGCTGG TGCAGGGCAC GACATTGGGG
CGGGTGATTG CCTGGGCGCG GCTGGCACCG GAGACGGAAA GAGCGCGCCT CACCATGAGC
CAGGCCGAAG CCGCCATGGC ACAGGTGCAA CTCGGGATCG TCAAAAACCT GGCATATGAC
GCAAAGGGAA CGCTCATCCA CCCGCAATTG CTGGAGCGCT ATCAGCGCAG GGCCACAGCG
ATCGTCGACT ATGCCGAGAG AACGGAGCAT TACGTACCGG TGCTCCATGC TCATTTCGAC
GTCGTTCTCG AAGCAGTTGC CACGGGACGC CGGGAGCTTA TTCGCCTCCA TCGCGCCGGC
GACATCGACG ACGAAACGTT AGACGAGCTG GAACGGGATC TCGATCTCGA GGAACTGAGC
GCGATCTCGG CCAAGGCGTG A
 
Protein sequence
MEPTHLFELV IAMFLAIIAL HYAAHRLGLP PSVALLTGGA LLAFVPGLPA ISVDPELVLV 
IFLPPLLMDG AWAIALARLR RHMIGIASLA VGAVLFTCAV VAVVAHLIFP SLPWAACAAL
GAIVAPPDAV SARAVLERVR LPRRLQILLE GESLLNDASG LVLFRFAVAA VATGAFSAGE
AVGSFFVLAL GGAVVGVVVG TAWVKLARRL GDEYLIIAAT VLLAWISYLL GELLHVSGVI
ATVTTGLIAS WHQHTVFSAA TRMRGTSFWT VMIFLMEASV FTLIGLSLRD VVERGGGLTT
VIATMGLAML AILLTLVVAR FAWVFASDLI IKFCAALGVT RAQPLGVGGA TVLSWAGVRG
VITLALALSL PEGFPGRDFI LATSFAVILG TVLVQGTTLG RVIAWARLAP ETERARLTMS
QAEAAMAQVQ LGIVKNLAYD AKGTLIHPQL LERYQRRATA IVDYAERTEH YVPVLHAHFD
VVLEAVATGR RELIRLHRAG DIDDETLDEL ERDLDLEELS AISAKA