Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2545 |
Symbol | |
ID | 8013513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 2543035 |
End bp | 2544915 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644825124 |
Product | ABC transporter related |
Protein accession | YP_002976354 |
Protein GI | 241205258 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.489481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATTT CAGATGCGAT CTATCGTCCT TTCGAAAGCC TGATCCGGCC GCTCGATATT CCCTACCGGC CACTGCCGTC CAAGGGGCCG GTGGCAGTGC TCCTGCATTT CATCTCGATG TTTCGCGGCG TGCTGATTGT GGTGACGCTT TGCACCATGG CGAACGAGGC CATGAATCTA AGCATTGTCT GGGGGCTGTC GGTCATCGTC GACGGTGTTA CGCAACAGGG TGCATCCGCT TTCCTGGCGA GTGAATGGCC GCTGCTGACC TTCCTCGGCC TGCTGCTCTT TCCGGCCATG CCGATCGCCT CGTTCCTCGT CAACACGCTG ACTTCGCATA CGCTCGGCAT CGGCATGCCG GCCGCCATCC AGTGGCAGGG CCACAAGGCG GTGGAGCGGC AGGATCTCGG CTTCTTCCAT GATCTCTACG CCGGCCAGGT CGCCTCGCTC CTGCAGCAGG TGGCCTCTGC TGTCCAGCAG CAGCTCATTT CCGCCTTCCA GTCCATTCCA CGCTTCCTGA TGCAGATGGT GGGCTCCGTG ATCCTACTCA GCGCCTTGTC CTGGCAACTC GCCGTGCCGA CCGTCATCTG GATCACGCTC AACGTCCTGC TCGCCGTCAG GCTGGCACCG ATCTTTACCG AGCGCGCTCG CCGCTCCGCC AAGCGGCGCA GCCTGATCGC CGGCGCCATC ACCGATCTCT ACACCAACAT GCAGATGGTC AAGCAGTTCG CCGCTGAAGA CAGCGAGGCG GGCACCATCC GCGGTATTAT CGGCAAGTCG ATCGAGACGC AGCAAAGCGA ACAACGCATT TATCGCACAG CCGAGCTGAC GGTCGTCGTC CTCAACGTGC TGCACTGGCT GTCCATTCTG TCGATCGGCT TTACCGGCCT CGTCGAGGGG TTCGTGACGA TCGGCGAATT TACCGGCGCC GTCTATGTCC TCCAACGGCT GTCCGGCCAC ACCTTCACCT TCCTGCAAAT GGGCCAACAG ATCTTCCAGG CGATCGGCAC GATCAAGGAT GCCATGCCTG TTATGACGAC ACCGCCCACT ATCACCGACC GGACGGATGC GAAGAACCTC GTGGTCGAGC GTGGTGAAAT CCGTTTCGAA AATGTCCGCT TCGCCTACAA GTCCGGCAAG CCTGTTATCG ATGACCTGTC GCTGACGGTT CGGCCCGGCG AAAAGGTAGG GCTCGTCGGC CTCTCCGGTG CCGGCAAGAC GACGCTGGTG AGCCTGCTGC TGCGTTTTTA CGACATAGAG GATGGTGCGA TCTTCATCGA CGGGCAGGAT ATCCGCGCCG TCACCCAGGC GAGCCTGCGC CGCTCCATCG GGGTCATCGC GCAGGACGTC GCGCTGCTGC ACCGTTCGGT CGGCGACAAT ATCCGTTACG GCCGGCCGGA GGCGACGAAG GACGAGATCG AAGCGGTGGC GAAGATTGCG AGTGCCGATG TCTTCATCGC CGATCTTTCC GACGGCGAAG GCCGCAAGGG CTACGAGGCC TTCGTCGGCG ACCGCGGCAT CAAACTGTCA GGCGGCCAGC GCCAGCGCGT AGCCATCGCC CGCGTTCTCC TGAAGGACGC GCCGATCCTG GTGCTCGACG AGGCGACCTC CGCCCTCGAC AGCGAATCCG AAGCCGCCAT CCAGGAAAGG CTCAACCTCG TCATGGAGGG AAAGACGGTG ATCGCCATTG CACACCGCCT GTCGACCATC GCCAGGATGG ACCGGATCGT CGTGCTCGAT CACGGGCGCA TCGTGGAGGA GGGCAGGCCG GACGAACTGG TCGAACAAGA CGGCTTGTTC GCGCGCCTAT GGAAACGCCA GACCGGCGGC TTCATTCCCG AAGATATCGA CGAACCCTTG CCGGCCTCGC CTACGACCTG A
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Protein sequence | MSISDAIYRP FESLIRPLDI PYRPLPSKGP VAVLLHFISM FRGVLIVVTL CTMANEAMNL SIVWGLSVIV DGVTQQGASA FLASEWPLLT FLGLLLFPAM PIASFLVNTL TSHTLGIGMP AAIQWQGHKA VERQDLGFFH DLYAGQVASL LQQVASAVQQ QLISAFQSIP RFLMQMVGSV ILLSALSWQL AVPTVIWITL NVLLAVRLAP IFTERARRSA KRRSLIAGAI TDLYTNMQMV KQFAAEDSEA GTIRGIIGKS IETQQSEQRI YRTAELTVVV LNVLHWLSIL SIGFTGLVEG FVTIGEFTGA VYVLQRLSGH TFTFLQMGQQ IFQAIGTIKD AMPVMTTPPT ITDRTDAKNL VVERGEIRFE NVRFAYKSGK PVIDDLSLTV RPGEKVGLVG LSGAGKTTLV SLLLRFYDIE DGAIFIDGQD IRAVTQASLR RSIGVIAQDV ALLHRSVGDN IRYGRPEATK DEIEAVAKIA SADVFIADLS DGEGRKGYEA FVGDRGIKLS GGQRQRVAIA RVLLKDAPIL VLDEATSALD SESEAAIQER LNLVMEGKTV IAIAHRLSTI ARMDRIVVLD HGRIVEEGRP DELVEQDGLF ARLWKRQTGG FIPEDIDEPL PASPTT
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