Gene Rleg_2451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2451 
Symbol 
ID8015687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2452011 
End bp2452673 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID644825032 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002976262 
Protein GI241205166 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.231719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTT TCCTGGCGCC CTATGGCGAT TATGGTGCCG AATGGCTGCC TCTGCTGCTG 
CGGGCGATGG TGAATACGGC CCTGCTTTCC GTTTGTGCGT TTGCCCTGGC ATTCGTTTTC
GGCCTGCTGC TTTCGCTCTG CCAGAAATCC AGTTTCGCAG CGCTGCGGTA TTTTGCGGCT
CTCTATGTGA CGATCGTGCG TGGCGTGCCG CTGCTGGCGG TTCTGTTTCT GATTTATTTC
GGCTTGCCGG GTGTCGGGAT TGTCCTTGAT GCTTTCGGCG CGGCGATTGC GGGCCTGGCG
TTGTGTTTCG CGGCCCAGGT CGCAGAGCTT TTCCGCGCCG GCCTGAAGGC TATACCGGCC
GGGCAGAGCG AAGCCGCGTT GGCCGCGGGC TTTACCCCGG CCCAGAGCTT CGTCCTGATA
ATCCTGCCGC AGGTCGCCCG TGTCATTCTG GCGCCGATGA TCATCACCTT CGTCTCGCTG
CTCAAGGATT CTTCTCTCGC TTCGCTGATT ACCGTCAACG AACTGGTCCT CACCGGGCGG
TCCATGGCGA CCGAGTATTT CCTGCCCTTG CAAATCTACA TTGCCGTCGG CCTCTGCTAT
TTCGCGATAG CCTGGCCTTT CTCGGTCCTC TCGCGCCGGC TAGCCCTTTC GGCCGCCCGC
TAA
 
Protein sequence
MSAFLAPYGD YGAEWLPLLL RAMVNTALLS VCAFALAFVF GLLLSLCQKS SFAALRYFAA 
LYVTIVRGVP LLAVLFLIYF GLPGVGIVLD AFGAAIAGLA LCFAAQVAEL FRAGLKAIPA
GQSEAALAAG FTPAQSFVLI ILPQVARVIL APMIITFVSL LKDSSLASLI TVNELVLTGR
SMATEYFLPL QIYIAVGLCY FAIAWPFSVL SRRLALSAAR