Gene Rleg_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2420 
Symbol 
ID8013402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2420434 
End bp2421669 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content62% 
IMG OID644825001 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002976231 
Protein GI241205135 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.260445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCA GCACCGAACG ACCACCGGTA GCGGCCATTG CCGCGCTCGG GCTGACGCAG 
ATCATCGGTT ATGGATCGCT CTATTACAGC TTCAGCATCC TCGCCCCCGA CATGGCCCGT
GATTTGGGCT GGTCATCTGA ATGGATCTTC GGCGCGCTCT CTGTGGCCCT TCTGATCGGC
GGTCTGGCCG CACCTCTCAT GGGCACGTGG ATTGATCGCT TCGGCGCAGG CAGGATCATG
ACGTCGGGCT CGGCGATTGC CGCCGCCGCC CTCGTCGCCT GCGCCTTCGC GCCGGGAAAG
ATCGCTTTCG TCGCGGCATT GATCGGCATC GAGATCGCCT CGAACCTGGT GCAATATGGC
GCAGCCTTCG CCCTGCTCGT GCAGATCAGG CCGCAGGTCG CCCAGCGCAG CATCACCTAT
CTGACCCTAA TCGCCGGCTT CGCCTCAACC ATTTTCTGGC CGATCACCAC GGCGCTGCAT
GCGCATCTCT CATGGCAGAA CGTCTATCTG ATTTTCGCCG CGCTCAATCT CGTTGTCTGC
CTTCCCATTC ATGCCTGGCT CTCCCGTGGC ATCAGCCAAA CCAGGGGACG GACCGGAGAG
GAGGCCGCAA AACGCGCCGA GCCGAGCCTT CCGCCGTCGG TGCGCAGGCT GGCCTTTATC
CTGATGGTGA CAGGCTTTGC TTTGGAAAGC TTCGTGAACT CGGCGCTTCT GGTTCACATG
GTGCCTGTGA TGTCGGCCCT CGGCCTCGGC GCCATGGCAG TGGTGGTCGG AACGCTCTTC
GGCCCGTCAC AGGTGCTGAG CCGCCTCATC AACATGGTCT TTGGCGAGAG CTTGTCGCAA
GTGATGCTCG CGATCATCTG CGCCATCTTG CTGCCGACAG CCCTTGTCAT CCTCATCGCC
ACCGCACCCT CGGTGCCTGG TGCGCTGGTC TTCGCCGTCG TCTTCGGCCT CGGCTCGGGG
CTTAACAGCA TCGTCTACGG AACCTTGCCG CTCGCGCTCT TCGGAAGCGA TGGCTACGGC
CGGCGGCAAG GACAAATCAT GTCGGTTCGT CTCGTCGTCT CCTCGATGGC GCCGTTCGCG
CTTGCCTTCC TGATGGGCTA TCTCGGCGTA TCATGGTCAC TATCGATCGC TGCATTGCTC
AGCACCGTCG CCGTTGCCGC ATTCTTCGCC ATCACGCGGC TGACGCGCCC GGTTGTTGCC
CGGCCGGAAC CTGTTCCCAA TCCCGGAGAA GCTTGA
 
Protein sequence
MTISTERPPV AAIAALGLTQ IIGYGSLYYS FSILAPDMAR DLGWSSEWIF GALSVALLIG 
GLAAPLMGTW IDRFGAGRIM TSGSAIAAAA LVACAFAPGK IAFVAALIGI EIASNLVQYG
AAFALLVQIR PQVAQRSITY LTLIAGFAST IFWPITTALH AHLSWQNVYL IFAALNLVVC
LPIHAWLSRG ISQTRGRTGE EAAKRAEPSL PPSVRRLAFI LMVTGFALES FVNSALLVHM
VPVMSALGLG AMAVVVGTLF GPSQVLSRLI NMVFGESLSQ VMLAIICAIL LPTALVILIA
TAPSVPGALV FAVVFGLGSG LNSIVYGTLP LALFGSDGYG RRQGQIMSVR LVVSSMAPFA
LAFLMGYLGV SWSLSIAALL STVAVAAFFA ITRLTRPVVA RPEPVPNPGE A