Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2406 |
Symbol | |
ID | 8013391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2410666 |
End bp | 2411685 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644824987 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002976217 |
Protein GI | 241205121 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0277312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGGA TGCAGATCAA GAAGCGTTCG GTAGTCTTCT TTATGGTACC GCAATTCACC ATGCTGCCCT TTTCGGCGGC CGTGGACACC TTGCGCATCG CCAATCGCAT GCTCGGCTAT CAGGCCTATA CCTGGCGGCT GACCTCCGTC GATGGAGAAA AGGTCTATTC CTCCTGCGGC ATCGGCGTCG AGGCAAATTC CTCGCTTGCC GAGGAGCGCC GTCATCTCGG CGGCGAAAAC CGGCCGGGCA TGGTCCTCGT CTGTTCCGGC ATCGATGTCG AGCAGTTCAA CAACAAGTCG GTCAATGCCT GGCTGCGTGA ATGCTACAAT CGCGGTGTCG CCGTCGGCAG CCTCTGTACG GGCGCGCATG TGCTTGCCCA GGCCGGCCTC CTGAATGGCA AGCGCTGCGC CATCCACTGG GAAAACCTCC CGGGCTTTTC GGAAGCCTTC CCGCAGGCCG AGGTCTATGC CGATCTCTAC GAGATCGACG GCAATCTCTA TACCTGCGCC GGTGGCACCG CCTCGCTCGA CATGATGCTG AACCTCGTCG GCGAGGACTT TGGCGAAAGC CTTGTCAACC GCATCTGCGA GCAGCACCTG ACTGACCGCG TGCGCAACCC GCACGACCGC CAGCGTCTGC CGCTGCGCGC CCGTCTCGGC GTGCAGAATG CCAAGGTTCT GTCGATCATC GAGCTGATGG AAGGCAATCT CGCCGAGCCG CTGTCGTTGA TCGAAATCGC CGACGGCGCC GGCCTCTCCC GCCGCCAGAT CGAACGGCTG TTCCGCCAGG AAATGGGACG CTCGCCGGCC CGCTACTATC TGGAAATCCG TCTCGACCGT GCGCGCCACC TCCTGGTGCA GTCCTCGATG CCGGTCGTCG AGGTCGCCGT TGCCTGCGGC TTCGTCTCCG CCTCGCATTT CTCCAAGTGT TATCGCGAAC TCTACCATCG CTCGCCGCAA CAGGAGCGCG CCGAGCGCAA GATGACCATG GCGACCGCTC GCCAGGCCGT CGCCGCCTGA
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Protein sequence | MNRMQIKKRS VVFFMVPQFT MLPFSAAVDT LRIANRMLGY QAYTWRLTSV DGEKVYSSCG IGVEANSSLA EERRHLGGEN RPGMVLVCSG IDVEQFNNKS VNAWLRECYN RGVAVGSLCT GAHVLAQAGL LNGKRCAIHW ENLPGFSEAF PQAEVYADLY EIDGNLYTCA GGTASLDMML NLVGEDFGES LVNRICEQHL TDRVRNPHDR QRLPLRARLG VQNAKVLSII ELMEGNLAEP LSLIEIADGA GLSRRQIERL FRQEMGRSPA RYYLEIRLDR ARHLLVQSSM PVVEVAVACG FVSASHFSKC YRELYHRSPQ QERAERKMTM ATARQAVAA
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