Gene Rleg_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2379 
Symbol 
ID8013367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2383813 
End bp2384946 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content62% 
IMG OID644824960 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_002976190 
Protein GI241205094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.207918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00252302 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAACAGC AGCTGTCGGA AATTATTGGC GCTATTTATG ATTGCGTGGC CCGGGAGGAT 
GCCTGGCCAA ACGCTCTTCG TCTGATCAAT GGTCAGGTGA ACGGTTTTCT AACCACGCTT
GCCGTCTTCG ACACCACCAC GCGTTCCGCA CGGCTGGCCC AGATCGCCTG CGACGACGGA
GAGGCCATCC GCACCCTCGT CGCGCATGCG AAGGACGTCC CGTTCTTCCA CCTTCTCCAC
CGAATGGAGA TCGATCAGCC GGATACGCTG GAGCGGATGT TTTCCCTCTA TGGACCCGAT
GGCGAAGCCG TCTGGAAAAG CGGTGCGCTA CACCAGAACT TTCATGCCAG GTATGGGGTT
CTAAACTCGA TCGACATGGC CGTGCTGAAG CGCCCGACCC GTGTCGGGAC GATCAACATT
TCGGTGCAAT ACGAACCGAG CGAGCGACGT GTCTTCGACA TCATCGGGCT GCTCGGTCCG
CATATCCGCC GTGCCGTGAC GATCCACGAC ATGTTCGAGA TGGAGCGCGC CGAAGCCGCC
GTCCTCAGGG AGGTCATCGA CGCCCTCGAT CATGCGGTCT TCATCGTTGC AGAAGACATG
ACAATCCTCT TCGCCAATGA AGCCGCCGAA GCGCGGCTGC GCGAGCAGCA CGTGGTCCAC
TCGCTTTCAG GCCGTCTGGC CGCTCGCTAT AGTTATGCAG GCGCCGCCCT TTCCAACGCA
GTGGCGCTTG GCGCGCGCGA CGAAATCAGT CTCGCAGCCG CTGGGATCGA TGTTCCCCTT
GCCTCGGCGG AGCGCCCCGC CGTCGCCCAC GTTCTGCCGT TGCAGCGGCG CACCGAAAGG
GGACGCTTCG AAAGCCGGGC GGCGGCGGCG ATCTTTCTCG CCGCGGCTGG AACGGTGGTC
CAGTCTGCCG TCGAAGCCGT TGCCGCCCTT TTTGCTCTCA CGCCTGCCGA ACGGCGCGTG
GTCGGCTACG TGTCCGAAGG TATGACGCGA TCCGAGATTG CAAATGCGCA GGGCGTTGCC
GACGGCACCG TGAAATCGCA ACTGGCCGCC ATCTACGACA AGACGGGAGC GGAAGACCAG
CGCAGCCTGC AGCAGCTCGT ACGCGAACTC AGCCCACCTG TCAGGCGCGC CTAA
 
Protein sequence
MEQQLSEIIG AIYDCVARED AWPNALRLIN GQVNGFLTTL AVFDTTTRSA RLAQIACDDG 
EAIRTLVAHA KDVPFFHLLH RMEIDQPDTL ERMFSLYGPD GEAVWKSGAL HQNFHARYGV
LNSIDMAVLK RPTRVGTINI SVQYEPSERR VFDIIGLLGP HIRRAVTIHD MFEMERAEAA
VLREVIDALD HAVFIVAEDM TILFANEAAE ARLREQHVVH SLSGRLAARY SYAGAALSNA
VALGARDEIS LAAAGIDVPL ASAERPAVAH VLPLQRRTER GRFESRAAAA IFLAAAGTVV
QSAVEAVAAL FALTPAERRV VGYVSEGMTR SEIANAQGVA DGTVKSQLAA IYDKTGAEDQ
RSLQQLVREL SPPVRRA