Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2379 |
Symbol | |
ID | 8013367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2383813 |
End bp | 2384946 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644824960 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_002976190 |
Protein GI | 241205094 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.207918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00252302 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAACAGC AGCTGTCGGA AATTATTGGC GCTATTTATG ATTGCGTGGC CCGGGAGGAT GCCTGGCCAA ACGCTCTTCG TCTGATCAAT GGTCAGGTGA ACGGTTTTCT AACCACGCTT GCCGTCTTCG ACACCACCAC GCGTTCCGCA CGGCTGGCCC AGATCGCCTG CGACGACGGA GAGGCCATCC GCACCCTCGT CGCGCATGCG AAGGACGTCC CGTTCTTCCA CCTTCTCCAC CGAATGGAGA TCGATCAGCC GGATACGCTG GAGCGGATGT TTTCCCTCTA TGGACCCGAT GGCGAAGCCG TCTGGAAAAG CGGTGCGCTA CACCAGAACT TTCATGCCAG GTATGGGGTT CTAAACTCGA TCGACATGGC CGTGCTGAAG CGCCCGACCC GTGTCGGGAC GATCAACATT TCGGTGCAAT ACGAACCGAG CGAGCGACGT GTCTTCGACA TCATCGGGCT GCTCGGTCCG CATATCCGCC GTGCCGTGAC GATCCACGAC ATGTTCGAGA TGGAGCGCGC CGAAGCCGCC GTCCTCAGGG AGGTCATCGA CGCCCTCGAT CATGCGGTCT TCATCGTTGC AGAAGACATG ACAATCCTCT TCGCCAATGA AGCCGCCGAA GCGCGGCTGC GCGAGCAGCA CGTGGTCCAC TCGCTTTCAG GCCGTCTGGC CGCTCGCTAT AGTTATGCAG GCGCCGCCCT TTCCAACGCA GTGGCGCTTG GCGCGCGCGA CGAAATCAGT CTCGCAGCCG CTGGGATCGA TGTTCCCCTT GCCTCGGCGG AGCGCCCCGC CGTCGCCCAC GTTCTGCCGT TGCAGCGGCG CACCGAAAGG GGACGCTTCG AAAGCCGGGC GGCGGCGGCG ATCTTTCTCG CCGCGGCTGG AACGGTGGTC CAGTCTGCCG TCGAAGCCGT TGCCGCCCTT TTTGCTCTCA CGCCTGCCGA ACGGCGCGTG GTCGGCTACG TGTCCGAAGG TATGACGCGA TCCGAGATTG CAAATGCGCA GGGCGTTGCC GACGGCACCG TGAAATCGCA ACTGGCCGCC ATCTACGACA AGACGGGAGC GGAAGACCAG CGCAGCCTGC AGCAGCTCGT ACGCGAACTC AGCCCACCTG TCAGGCGCGC CTAA
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Protein sequence | MEQQLSEIIG AIYDCVARED AWPNALRLIN GQVNGFLTTL AVFDTTTRSA RLAQIACDDG EAIRTLVAHA KDVPFFHLLH RMEIDQPDTL ERMFSLYGPD GEAVWKSGAL HQNFHARYGV LNSIDMAVLK RPTRVGTINI SVQYEPSERR VFDIIGLLGP HIRRAVTIHD MFEMERAEAA VLREVIDALD HAVFIVAEDM TILFANEAAE ARLREQHVVH SLSGRLAARY SYAGAALSNA VALGARDEIS LAAAGIDVPL ASAERPAVAH VLPLQRRTER GRFESRAAAA IFLAAAGTVV QSAVEAVAAL FALTPAERRV VGYVSEGMTR SEIANAQGVA DGTVKSQLAA IYDKTGAEDQ RSLQQLVREL SPPVRRA
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