Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2350 |
Symbol | |
ID | 8013340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2355254 |
End bp | 2356045 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644824932 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002976162 |
Protein GI | 241205066 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0397043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCATCGG GAAGACGAAA AGATACGGCT CTCCTGGCGG CCCGCGCCGG CCAGTACCGC GAGGCTATGC CGCCGCCGGC GCTGCGACGC CATTTCAGCC GCCTCTGGTC GCATGCGCTG CATGACGGAC CGCCGGCAAT GGTGGCGATC GTGCCGGACG GCTATTGCGA CCTGCTCTGG ATCGACGGCC GGCTGGTCGT CGCCGGCCCT GACCGGACAG CGGCCTTTCC CGTCATCCGG CCGGGCGCGA CTGTCATCGG CGCACGTTTT GCGCCCGGCG CCGCAGCACC CTGGCTGAAA ACGCCGCTCT CGGCACTGGT CGGGTGCTCG GTGCCCCTTG CTGACATCGG CCGAAAGGAC ACCGCCGAAT TCGAAGCGCG GCTTGCGGAT TGTCTCGACC CCCCGGCCGC CACGGCGCTG TTTAGCCGCC TGCTCGAAGA GACCGCGCGC AATGAGGAGG AGCCAGCCCG CGACGCCGCC ATGATCTTCG CCGCCGCCGA CAATGCTCGC CCGGTGTCCG GCCTGCTCGA CCGCCTCGGC ATGAGTGAAA GGCAGCTGCG CCGCCGCTGC CACCACCATT TCGGCTACGG CGCAAAGACG CTGGAACGGA TTCGCCGGTT CCAGCGTTTC CTCGACCTCT GCCGCAGGTC GGGCGCTATG CCGCTTGCCC GCCTTGCGCT CGAAGCGGGC TTTGCCGACC AGCCCCACAT GACACGCGAG GTCGGCGAGC TCTCGACGCT GACACCTGCC GTCATTCTCG GCCAGCTCAG CATACGGCAA AGAGCCGATT GA
|
Protein sequence | MSSGRRKDTA LLAARAGQYR EAMPPPALRR HFSRLWSHAL HDGPPAMVAI VPDGYCDLLW IDGRLVVAGP DRTAAFPVIR PGATVIGARF APGAAAPWLK TPLSALVGCS VPLADIGRKD TAEFEARLAD CLDPPAATAL FSRLLEETAR NEEEPARDAA MIFAAADNAR PVSGLLDRLG MSERQLRRRC HHHFGYGAKT LERIRRFQRF LDLCRRSGAM PLARLALEAG FADQPHMTRE VGELSTLTPA VILGQLSIRQ RAD
|
| |