Gene Rleg_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2333 
Symbol 
ID8013326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2335336 
End bp2337795 
Gene Length2460 bp 
Protein Length819 aa 
Translation table11 
GC content61% 
IMG OID644824916 
Productbeta-mannosidase protein 
Protein accessionYP_002976146 
Protein GI241205050 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3250] Beta-galactosidase/beta-glucuronidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCATC GATCAACTAC TCCCAACATC GACCTTTCCG GTTCGTGGCA GCTCGCCTCC 
GTCGACGGCA AGATCCGCAC CGCGATCATG CTGCCGGGCG ACGTGCACAC GGCGCTCCAC
CGTGCAAGCT TGATCCCCGA TCCCTATTTC GGCCGCAACG AGGAAAAGGT GCAGTGGGTC
GCCGAGCGCG AATGGGCAGT CGAGCGCAGC TTCACGCTTC AGGAGATCGA GGGCGACTGG
TATCTCGATA TCGACTATCT CGACACGGTT GCCAGCGTCC ACGTCAACGG TTTTCTGGCG
CTCGAAGCCG ACAACAGCTT CCGCCGCTAT CGTCCTGACG TTTCCAGCAT GCTGAAATCA
GGCGACAACA GCATCCGCAT CGTCTTCGCC TCCAACGTCG CTGTCGGCGC TGCGCGACAG
AAGCAGCAGC CCTTCTACAT CCCCTACAGC ACGGGCAACT CGCCGATCCC CGACGGCAAC
ATGCTGCGCA AGCCGCAATG CCATTTCGGC TGGGACTGGA ACATTGCCAT TGCCCCGCTC
GGCCTCTACG GGACGATCGC GCTGAAGAAG CTCGAAACCG CGCGCATCGA ACATGTGGTC
ACCCGCCAGA CCCACAATAA CGACGGCTCG GTGGACCTCA AAGTGACGGC AACGCTGTTT
TCAAAGGGGC CAGACATTGC CCAGGTCTAT TTCGACCTCG ACGGCGAGCG GGTGCGCCTG
GATGTCGGCG TCAACGGCGA GACGCATGTC AACCACCTCT TCCATATCGA CAATCCGCGC
CTCTGGTGGC CCTCCGGCAG TGGCGAGCAG GCGCTCTACA GGCTTTCCGT CGAATTGCCG
ACTGATGAGG TGACCAAGCA GATCGGTCTT CGCACCATCG AGCTGATCAC CACGCCGGAT
GCATCAGGCA GTCGCTTCGC CTTCGAGGTC AATGGCCGCG AGATCTTCTG CCGCGGCGCC
AACTGGATAC CGGCCGACGC GCTGTTTTCG CTGTCTTCGC CCGAGAAGAC CGAAGACCTG
CTGCAATCGG CCAAAGCCGC CAACATGAAC ATGATCCGCG TCTGGGGCGG CGGCTTCTAT
GAGCAGGATC ATTTCTATGA TCTCTGCGAC CGGCTGGGCC TTATGGTCTG GCAGGACTTC
ATGTTCGCCT GCAACCTTTA TCCCTCGACC GAGGACTTTC TCGACAATGT GACGATCGAG
GTCGATTTCC AGGTGCGCCG GCTCTCCTCG CATCCGTCGA TCGTGCTCTG GTGCGGCGAC
AATGAGCTGG TCGGAGCACT GACCTGGTTC GAGGAATCCC GTAAAGACCG CGACCGCTAT
CTCGTCTCCT ATGATCGCCT CAACCGCACG ATCGAGCAGG CAGTGAAAAA GGCGCTGCCC
GGCGCGCTCT GGTGGCCTTC GAGCCCGGCT TCCGGTTATC TCGATTTCGG CGATGCCTGG
CATGCGGACG GATCCGGCGA CATGCATTAC TGGTCGGTCT GGCACGAGAA CAAGTCGTTC
GACAACTACC GCTCGGTGCG TCCACGCTTC TGCTCGGAAT TCGGCTTCCA GTCCTATACG
TCGCTGCCTG TGATCAAGAC CTATGCCGAG GCGAAAGACA TGAACATCGC TTCCCCGGTC
ATGGAGCTGC ACCAGAAGAA TGCCGGCGGC AACGAGCGCA TCGCCGGCAC GATGTTCCGT
TATTTCCGCT TCCCCAAGGA TTTTCCGAAC TTCGTCTATC TCTCCCAAAT CCAGCAGGGG
CTGGCGATCA AGACGGCGGT GGAATACTGG CGGTCGCTCA AACCCCATTG CATGGGCACG
ATCTACTGGC AGCTCAACGA CACCTGGCCG GTCGCCTCCT GGTCGAGCCT CGACTATGGC
GGCCGCTGGA AGGCGATGCA CTATCTCGTC AAGCGCTTCT TCCAGCCGGT CGCGGTCGCG
GCCATTCCTT CCGACGACGG CAAGACGATC CGTTTCTCGC TGGTCAACGA CACGCTTGCC
GATGTCAGTG TCGACCTTTC GATCTCGCTG CTGACGACGA AGGGCGAGCG CCGACACCTG
AGAGACGTAC GGGCCATATG TTCGCCGGAT GCGGCCGTCA CTGCCACGAG CATCGACGTT
TCCGATATTC CCGAGGGAAC GTTGCTTGCC TGGCGTTTCA CCGCGTCGAA CGGCACAGGC
GGCGAGGGGC ACCATGTCAA CGGTACCTAC AAGGCGCTGG AGCTGGAACC TGCGGGGCTG
ACAGTCACCC ACGACTATGT CGAGGAGAAT GGCTCCGTCG ACATAAACGT CACCGCTAGG
GGACTTGCGC TTTTCGTGAT GATCGAAACC GAGACCGACG GCAAATATTC CGACAACGCC
TTCGATCTTG CGGCCGGCGA GAGCCGCCGC ATCACCTTTA CCCCGGCACG GCCGCTTGAT
CGTGGCGCGC TTCCGGAGTT CCGGTTCTAC GACCTGTATT CCTGCCAGTC GGCGGATTGA
 
Protein sequence
MTHRSTTPNI DLSGSWQLAS VDGKIRTAIM LPGDVHTALH RASLIPDPYF GRNEEKVQWV 
AEREWAVERS FTLQEIEGDW YLDIDYLDTV ASVHVNGFLA LEADNSFRRY RPDVSSMLKS
GDNSIRIVFA SNVAVGAARQ KQQPFYIPYS TGNSPIPDGN MLRKPQCHFG WDWNIAIAPL
GLYGTIALKK LETARIEHVV TRQTHNNDGS VDLKVTATLF SKGPDIAQVY FDLDGERVRL
DVGVNGETHV NHLFHIDNPR LWWPSGSGEQ ALYRLSVELP TDEVTKQIGL RTIELITTPD
ASGSRFAFEV NGREIFCRGA NWIPADALFS LSSPEKTEDL LQSAKAANMN MIRVWGGGFY
EQDHFYDLCD RLGLMVWQDF MFACNLYPST EDFLDNVTIE VDFQVRRLSS HPSIVLWCGD
NELVGALTWF EESRKDRDRY LVSYDRLNRT IEQAVKKALP GALWWPSSPA SGYLDFGDAW
HADGSGDMHY WSVWHENKSF DNYRSVRPRF CSEFGFQSYT SLPVIKTYAE AKDMNIASPV
MELHQKNAGG NERIAGTMFR YFRFPKDFPN FVYLSQIQQG LAIKTAVEYW RSLKPHCMGT
IYWQLNDTWP VASWSSLDYG GRWKAMHYLV KRFFQPVAVA AIPSDDGKTI RFSLVNDTLA
DVSVDLSISL LTTKGERRHL RDVRAICSPD AAVTATSIDV SDIPEGTLLA WRFTASNGTG
GEGHHVNGTY KALELEPAGL TVTHDYVEEN GSVDINVTAR GLALFVMIET ETDGKYSDNA
FDLAAGESRR ITFTPARPLD RGALPEFRFY DLYSCQSAD