| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2291 |
|---|
| Symbol | |
|---|
| ID | 8013290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 2301028 |
|---|
| End bp | 2301858 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644824876 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002976106 |
|---|
| Protein GI | 241205010 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.927102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACG CCGAAACACT GATCCCGCCG CAGCCCGCAC CCCGGGAAGT GATGAAGCCG
ATGACACCGG CGCGCATGGC CGGCTATATC CTCGTCGCTC TCTGGGCTCT GCTTGGGGTG
CTCCTGGTGA TCTCCGTCAT CAATGGCTGG GATCCGGAAA AATTCACCCG CTACGGGCCG
CGTTATCTCC ATGGCCTCTG GATAACGCTG AGCCTCGTTT TCATTTCCGT TATCTGCGGC
GCCATCCTGT CGCTGCCGCT TGCCGTGGCG CGCATGTCAA AGAACCGGGT GCTGAATGCG
CTGGCCTACG GCTACATCTA TTTCTTCCGC GGCACGCCAC TGCTTGCCCA GCTGTTCCTG
GTCTATTACG GCCTCGGCAT ATTCCGGCCG CAGCTTGAGG CCGTCGGCAT CTGGTGGTTC
TTCCGCGAAG CCTGGTATTG CGGCCTCTTT GCCATGACCA TCAACACCGC GGCCTACCAG
GCGGAAATCC TGCGCGGCGC CATCGAAAGC GTGTCGCATG GCCAGCACGA GGCGGCCGCG
GCACTCGGCA TTCACAAGTT CATCGCCTTC CGCAAGATCA TCCTGCCGCA GGCTCTCATC
GTCGCACTTC GCCCTTATGG CAACGAAATC ATCCTGCTGA TCAAGGGCTC GGCGGTCGTC
GCCATCATCA CCGTACTCGA CCTGATGGGC GAAACCCGTT ACGCCTTCTC CCGCACTTTC
GACTACCAGA CCTATCTCTG GGCGGCGATC TTCTACCTCA CCATCGTCGA AGCCTTACGC
CATCTCTGGG CCTGGTTCGA GCGCCGCCTG ACCCGGCATC TCAAGCGCTG A
|
|---|
| Protein sequence | MSYAETLIPP QPAPREVMKP MTPARMAGYI LVALWALLGV LLVISVINGW DPEKFTRYGP
RYLHGLWITL SLVFISVICG AILSLPLAVA RMSKNRVLNA LAYGYIYFFR GTPLLAQLFL
VYYGLGIFRP QLEAVGIWWF FREAWYCGLF AMTINTAAYQ AEILRGAIES VSHGQHEAAA
ALGIHKFIAF RKIILPQALI VALRPYGNEI ILLIKGSAVV AIITVLDLMG ETRYAFSRTF
DYQTYLWAAI FYLTIVEALR HLWAWFERRL TRHLKR
|
|---|
| |