Gene Rleg_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2220 
Symbol 
ID8013229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2223856 
End bp2224683 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID644824806 
ProductWD40 domain protein beta Propeller 
Protein accessionYP_002976036 
Protein GI241204940 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0661774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.390598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCT CGGTTGAGAT CTACAATGTC CGAACGGGCA GGGCCCGCGA GGTCTGGCAG 
ACGGACAAGC TGGTGGAGGC GCCGAATTTC TCGCCGGATG GTTCCTACCT GCTCTTGAAC
GGCGATGGGC TGCTTTACCG GTTGCCGCTC GATGGCGGCG AGGTGGTCAA GGTTGATACC
GGCTTTGCCG TCAACTGCAA TAATGATCAC GGCATTTCGC CCAATGGCAG TGAGATCGTC
ATTTCCGACA AGACCGAATT CGGCAAGTCG GCGATCTATA TTCTGCCGAT CGAAGGCGGC
ACGCCGAGGC TGATCACCGA GAACCTGCCA TCCTACTGGC ATGGCTGGTC GCCGGACGGG
CGCCAACTCG CCTATTGCGG CATCCGCGAC GACCTCTTCG ATATCTACAC CATCTCCGTC
GACGGCGGCG CCGAGACGCG GCTGACGCAT GGCGAGGGGC GCAATGACGG ACCGGATTAT
TCCGCCGACG GCCAATGGAT CTATTTCAAT TCCAGCCGCA CCGGGCTGAT GCAGATCTGG
CGCGTCCATC CCGACGGCAC GGGTCTCCAG CAGGTGACAT CAGACGATTA CGGCAACTGG
TTCGCCCATC CGTCGCCCAA CAACGACATG GTGCTGCTCT TGTCCTACGA CCCGTCGGTA
TTCGACCATC CGCGCGACCT CGACGTACGG CTGCGGCTGA TGGATATGGA TGGCGGCAAT
CTGAAGACGC TGTTCGAGCT CTTCGGGGGG CAGGGCACGA TCAACGTGCC CTGCTGGTCT
CCTGACGGCG AAGAGTTCGC CTATGTCCGC TATTTCCCGG CGGCTTAA
 
Protein sequence
MRSSVEIYNV RTGRAREVWQ TDKLVEAPNF SPDGSYLLLN GDGLLYRLPL DGGEVVKVDT 
GFAVNCNNDH GISPNGSEIV ISDKTEFGKS AIYILPIEGG TPRLITENLP SYWHGWSPDG
RQLAYCGIRD DLFDIYTISV DGGAETRLTH GEGRNDGPDY SADGQWIYFN SSRTGLMQIW
RVHPDGTGLQ QVTSDDYGNW FAHPSPNNDM VLLLSYDPSV FDHPRDLDVR LRLMDMDGGN
LKTLFELFGG QGTINVPCWS PDGEEFAYVR YFPAA