Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_2202 |
Symbol | |
ID | 8013212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 2204384 |
End bp | 2204944 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644824788 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002976018 |
Protein GI | 241204922 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.243165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGTAGATA GCCCCCGCAA CAGAAAGAAA CAGCCGGATG TCGTGCGACA GGCTCTCCTC GATTGCGCCA CCAAGCTGGC GCTTGAGCAT GGTCTCGCCG CAGTCAGCCT GCAGGCGGTC GCAAGTGCTG CCGGCGTGAC CAAGGGAGGG TTGTTTCACC ACTTCCCCAA TAAGCAGGCG CTTATAGAGG CTGTGTTCGA CGGCATGATG GAAAACCTCG ACCGGGAGAT CGATGAGGAA CTGGAAAAGG ATAAGGGCGG CCACGGCACA TTCACCCGCG CCTATGTCCG CACCCTGTTT GCCGACCGCG CCCTCAACAA TAGCCCATGG TCGGCGCAAA CGATGACCGT GCTCGCCGAC CCCTACTCCA AAAGCCTCTG GCACAGATGG ATGAATGACC GGCTGGTCAG GCACGCCGAA ACCGACATGG GAATGCGGCT CGAGATCGTT CGCCTGGCGG CGGACGGAGC ATGGCTTGCC CATGTTCTGA GGCCTGACGA CCATGCCGGT TCGGACGACG CGGCGCTGTT GCACGAATTG ATCGAACTCA CCGAAGGGTG A
|
Protein sequence | MVDSPRNRKK QPDVVRQALL DCATKLALEH GLAAVSLQAV ASAAGVTKGG LFHHFPNKQA LIEAVFDGMM ENLDREIDEE LEKDKGGHGT FTRAYVRTLF ADRALNNSPW SAQTMTVLAD PYSKSLWHRW MNDRLVRHAE TDMGMRLEIV RLAADGAWLA HVLRPDDHAG SDDAALLHEL IELTEG
|
| |