Gene Rleg_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2196 
Symbol 
ID8013207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2195600 
End bp2196583 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID644824782 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002976012 
Protein GI241204916 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.965659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.067704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTA CCCTCGATAT CCAGATGAAT TCCTTTCCGA TTGCCGGGAC CTTCACCATC 
TCCCGCGGGG CAAAGACCGA AGCCGAGGTC ATCACCTGCA CGCTTGTCGA AGAGGGTGCG
CAGGGGCGCG GCGAATGCGT GCCTTACCGC CGCTACGGCG AGACCATGGA GAGCGTTTTC
GCCCAGATCG AGGCGGCGCG ACCGCTGATC GAGGCCGGCA TTTCACGCCA TGACCTGCTG
TCGGCCATGC CGCCGGGCGC GGCCCGCAAC GCCGTCGATT GTGCCCACTG GGACCTTCAG
GCAAAACAGA CAGGAGACAG CGTCGCCGCC CGCCTCGGCA TTGCCGCTCC GCAGCCGCTC
ACCACCGCTT ACACCATCTC GCTCGGTGAA CCGGAGGTGA TGGCCGCCCA AGCGCGCGAG
CATGCCGGCC GCGCCCTGCT GAAGGTCAAG GTCGGCACCG GCGACGATGA AAGCCGCATC
CGCGCCGTCC GCGCCGCCGC CCCCGATGCC GCCATCATTC TCGACGCCAA TGAGGGCTGG
CCGGAAGCGG TGTTGGAGCG TCATCTCCAT ATCGCCGCCG AAGCAGGCAT CGCCCTCGTC
GAGCAGCCAC TGCCGGCCGG CCGCGATGGC CTGCTTGCCG AAATCCGCCG CCCGCTCCTC
GTCTGCGCCG ATGAGAGTGT CCACCACACC GGCGATCTCG CAAGCCTTGC CGACCGCTAC
GACGCGATCA ACATCAAGCT CGACAAGACC GGCGGCCTGA CGGAGGCGCT GTCGATGAAG
GCCGAGGCCG AACGGCTCGG ATTCAGTATC ATGATCGGCT GCATGGTCGG CACCTCGCTT
TCCATGGCGC CCGCCGTTCT CCTCGCCCAG AATGCCGATT TCGTCGATCT CGACGGTCCG
CTGCTGCTTG CCCGCGACCG CGATCCCGGC CTGCGCTACG CCGCTTCGCT GGTCTTTCCG
CCGGAAAGCA CCCTTTGGGG CTGA
 
Protein sequence
MPRTLDIQMN SFPIAGTFTI SRGAKTEAEV ITCTLVEEGA QGRGECVPYR RYGETMESVF 
AQIEAARPLI EAGISRHDLL SAMPPGAARN AVDCAHWDLQ AKQTGDSVAA RLGIAAPQPL
TTAYTISLGE PEVMAAQARE HAGRALLKVK VGTGDDESRI RAVRAAAPDA AIILDANEGW
PEAVLERHLH IAAEAGIALV EQPLPAGRDG LLAEIRRPLL VCADESVHHT GDLASLADRY
DAINIKLDKT GGLTEALSMK AEAERLGFSI MIGCMVGTSL SMAPAVLLAQ NADFVDLDGP
LLLARDRDPG LRYAASLVFP PESTLWG